RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 CHRNA1P02708 482 aa18.27■□□□□ 0.52
COPE-202ENST00000349893 PARP1P09874 1014 aaKnown RBP18.27■□□□□ 0.52
COPE-202ENST00000349893 FBXL6Q8N531 539 aa18.27■□□□□ 0.52
COPE-202ENST00000349893 ENAHQ8N8S7 591 aaPredicted RBP18.27■□□□□ 0.52
COPE-202ENST00000349893 ZSCAN10Q96SZ4 725 aaPredicted RBP18.27■□□□□ 0.52
COPE-202ENST00000349893 BCAS3Q9H6U6 928 aa18.27■□□□□ 0.52
COPE-202ENST00000349893 PLAGL2Q9UPG8 496 aa18.27■□□□□ 0.52
COPE-202ENST00000349893 CCND2P30279 289 aa18.26■□□□□ 0.51
COPE-202ENST00000349893 ICAM3P32942 547 aa18.26■□□□□ 0.51
COPE-202ENST00000349893 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
COPE-202ENST00000349893 NAALADL2Q58DX5 795 aa18.26■□□□□ 0.51
COPE-202ENST00000349893 METTL7BQ6UX53 244 aa18.26■□□□□ 0.51
COPE-202ENST00000349893 SUGP1Q8IWZ8 645 aaKnown RBP18.26■□□□□ 0.51
COPE-202ENST00000349893 CRIPAKQ8N1N5 446 aa18.26■□□□□ 0.51
COPE-202ENST00000349893 EFHBQ8N7U6 833 aa18.26■□□□□ 0.51
COPE-202ENST00000349893 INPP4AQ96PE3 977 aaPredicted RBP18.26■□□□□ 0.51
COPE-202ENST00000349893 GPR20Q99678 358 aa18.26■□□□□ 0.51
COPE-202ENST00000349893 VPS13AQ96RL7 3174 aa18.26■□□□□ 0.51
COPE-202ENST00000349893 FRMPD4Q14CM0 1322 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 ENPP3O14638 875 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 ZBTB5O15062 677 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 DHX16O60231 1041 aaKnown RBP18.25■□□□□ 0.51
COPE-202ENST00000349893 KDM4AO75164 1064 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 DGKIO75912 1065 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 HOXA13P31271 388 aaPredicted RBP18.25■□□□□ 0.51
COPE-202ENST00000349893 PDE1AP54750 535 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 MGAT3Q09327 533 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 LMBR1Q8WVP7 490 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 PPP2R3CQ969Q6 453 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 IGFLR1Q9H665 355 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 VAT1LQ9HCJ6 419 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 PCDHA1Q9Y5I3 950 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 KIAA1671Q9BY89 1806 aa18.25■□□□□ 0.51
COPE-202ENST00000349893 NRCAMQ92823 1304 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 DMDP11532 3685 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 SPATA31C2B4DYI2 1134 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 NOP56O00567 594 aaKnown RBP18.24■□□□□ 0.51
COPE-202ENST00000349893 STAM2O75886 525 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 DNAJB1P25685 340 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 NDUFV1P49821 464 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
COPE-202ENST00000349893 FOXK2Q01167 660 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 SIGLEC14Q08ET2 396 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 BTG3Q14201 252 aaPredicted RBP18.24■□□□□ 0.51
COPE-202ENST00000349893 NEDD9Q14511 834 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 LPIN1Q14693 890 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 TAF2Q6P1X5 1199 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 ASIC4Q96FT7 647 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 ZNF215Q9UL58 517 aaPredicted RBP18.24■□□□□ 0.51
COPE-202ENST00000349893 DCHS1Q96JQ0 3298 aa18.24■□□□□ 0.51
COPE-202ENST00000349893 DOCK5Q9H7D0 1870 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 ZNF213O14771 459 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 ITGB1P05556 798 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 GHRP10912 638 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 MRPS9P82933 396 aaKnown RBP18.23■□□□□ 0.51
COPE-202ENST00000349893 SEMA3FQ13275 785 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 GNPTABQ3T906 1256 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 ADGRD2Q7Z7M1 963 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 TRIM50Q86XT4 487 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 CMTR2Q8IYT2 770 aaKnown RBP18.23■□□□□ 0.51
COPE-202ENST00000349893 STAG2Q8N3U4 1231 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 SPPL3Q8TCT6 385 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 IRF2BPLQ9H1B7 796 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 ZSWIM5Q9P217 1185 aa18.23■□□□□ 0.51
COPE-202ENST00000349893 KAT6AQ92794 2004 aa18.22■□□□□ 0.51
COPE-202ENST00000349893 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
COPE-202ENST00000349893 B4E1Z4 1266 aa18.22■□□□□ 0.51
COPE-202ENST00000349893 GFRA3O60609 400 aa18.22■□□□□ 0.51
COPE-202ENST00000349893 GLP2RO95838 553 aa18.22■□□□□ 0.51
COPE-202ENST00000349893 MFAP1P55081 439 aaKnown RBP18.22■□□□□ 0.51
COPE-202ENST00000349893 ARHGAP4P98171 946 aa18.22■□□□□ 0.51
COPE-202ENST00000349893 CYFIP1Q7L576 1253 aa18.22■□□□□ 0.51
COPE-202ENST00000349893 PHF7Q9BWX1 381 aaPredicted RBP18.22■□□□□ 0.51
COPE-202ENST00000349893 USP15Q9Y4E8 981 aaPredicted RBP18.22■□□□□ 0.51
COPE-202ENST00000349893 MRPL42Q9Y6G3 142 aaKnown RBP18.22■□□□□ 0.51
COPE-202ENST00000349893 PLXNA3P51805 1871 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 MBLAC1A4D2B0 266 aaPredicted RBP18.21■□□□□ 0.51
COPE-202ENST00000349893 KLRF2D3W0D1 207 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 GCOM1H8Y6P7 765 aaPredicted RBP18.21■□□□□ 0.51
COPE-202ENST00000349893 POLR2MP0CAP2 368 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 ATF7P17544 494 aaPredicted RBP18.21■□□□□ 0.51
COPE-202ENST00000349893 TRAF1Q13077 416 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 FBXO47Q5MNV8 452 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 RUFY4Q6ZNE9 571 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 LINC01599Q8WXQ3 324 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 SUSD6Q92537 303 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 ZFP91Q96JP5 570 aaPredicted RBP18.21■□□□□ 0.51
COPE-202ENST00000349893 SENP7Q9BQF6 1050 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 MAD2L2Q9UI95 211 aa18.21■□□□□ 0.51
COPE-202ENST00000349893 PTPRZ1P23471 2315 aaPredicted RBP18.2■□□□□ 0.5
COPE-202ENST00000349893 RIF1Q5UIP0 2472 aaKnown RBP18.2■□□□□ 0.5
COPE-202ENST00000349893 PALM3A6NDB9 673 aaPredicted RBP18.2■□□□□ 0.5
COPE-202ENST00000349893 PROB1E7EW31 1015 aa18.2■□□□□ 0.5
COPE-202ENST00000349893 FIBPO43427 364 aa18.2■□□□□ 0.5
COPE-202ENST00000349893 NUBP1P53384 320 aa18.2■□□□□ 0.5
COPE-202ENST00000349893 VCPP55072 806 aaKnown RBP18.2■□□□□ 0.5
COPE-202ENST00000349893 TSHZ1Q6ZSZ6 1077 aa18.2■□□□□ 0.5
COPE-202ENST00000349893 TELO2Q9Y4R8 837 aa18.2■□□□□ 0.5
COPE-202ENST00000349893 SUPT16HQ9Y5B9 1047 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms