RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 TBC1D12O60347 775 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 PGK2P07205 417 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 ZNF18P17022 549 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 MCM7P33993 719 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 AMPD2Q01433 879 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 INF2Q27J81 1249 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 LETM2Q2VYF4 491 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
ABCF1-201ENST00000326195 FBXL16Q8N461 479 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 PLIN2Q99541 437 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 SLF1Q9BQI6 1058 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 GBP3Q9H0R5 595 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 PCDHB6Q9Y5E3 794 aa11.41□□□□□ -0.58
ABCF1-201ENST00000326195 RNF225M0QZC1 329 aaPredicted RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 MRPS25P82663 173 aaKnown RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 EARS2Q5JPH6 523 aaKnown RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 RESP18Q5W5W9 173 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 CHURC1Q8WUH1 139 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 ACBD3Q9H3P7 528 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 RBM28Q9NW13 759 aaKnown RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 AFG3L2Q9Y4W6 797 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 PITPNM2Q9BZ72 1349 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 IGKV6D-41A0A0C4DH26 115 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 AKR1B15C9JRZ8 316 aaPredicted RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 PDHXO00330 501 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 NFIBO00712 420 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 PPP1R11O60927 126 aaPredicted RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 CDC25AP30304 524 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 ARHGAP25P42331 645 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 GNAQP50148 359 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 USP14P54578 494 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 PPARDQ03181 441 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 NR1I3Q14994 352 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 TAF1CQ15572 869 aaPredicted RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 PREPLQ4J6C6 727 aaPredicted RBP11.4□□□□□ -0.58
ABCF1-201ENST00000326195 ODF2LQ9ULJ1 636 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 MYO6Q9UM54 1294 aa11.4□□□□□ -0.58
ABCF1-201ENST00000326195 CNTNAP5Q8WYK1 1306 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 CCDC194A0A1B0GVG4 234 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 BTBD19C9JJ37 291 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 SNAPC2Q13487 334 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 PKN1Q16512 942 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 ASPRV1Q53RT3 343 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 RGMBQ6NW40 437 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 POTEDQ86YR6 584 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 BRI3BPQ8WY22 251 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 CCDC47Q96A33 483 aaKnown RBP11.4□□□□□ -0.59
ABCF1-201ENST00000326195 NAPGQ99747 312 aaPredicted RBP11.4□□□□□ -0.59
ABCF1-201ENST00000326195 SELENOOQ9BVL4 669 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 ASCC2Q9H1I8 757 aaPredicted RBP11.4□□□□□ -0.59
ABCF1-201ENST00000326195 PSTPIP2Q9H939 334 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 PPP2R3BQ9Y5P8 575 aa11.4□□□□□ -0.59
ABCF1-201ENST00000326195 DDX39AO00148 427 aaKnown RBP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 N4BP3O15049 544 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 ZBED4O75132 1171 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 IPO7O95373 1038 aaKnown RBP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 BMP15O95972 392 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 ZNF76P36508 570 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 CCNHP51946 323 aaPredicted RBP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 TBC1D8BQ0IIM8 1120 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 PDCLQ13371 301 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 DEFB115Q30KQ5 88 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 FKBP15Q5T1M5 1219 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 GPATCH4Q5T3I0 446 aaKnown RBP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 FAM228AQ86W67 206 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 FOXP1Q9H334 677 aaPredicted RBP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 CENPHQ9H3R5 247 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 TCP11L1Q9NUJ3 509 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 SSC5DA1L4H1 1573 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 ROBO3Q96MS0 1386 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 DOCK2Q92608 1830 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 EME2A4GXA9 379 aaPredicted RBP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 EIF2AK2P19525 551 aaKnown RBP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 COG2Q14746 738 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 Q3C1V9 767 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 RRAGBQ5VZM2 374 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 ANKRD35Q8N283 1001 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 ARL8AQ96BM9 186 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 SHISA4Q96DD7 197 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 CAPZA3Q96KX2 299 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 CSRNP2Q9H175 543 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 DDX20Q9UHI6 824 aaKnown RBP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 HPSEQ9Y251 543 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 CHUKO15111 745 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 FXR1P51114 621 aaKnown RBP eCLIP11.39□□□□□ -0.59
ABCF1-201ENST00000326195 PPFIA1Q13136 1202 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 WHAMMP3Q1A5X7 153 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 C11orf91Q3C1V1 193 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 OTUD6BQ8N6M0 293 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 TXNRD2Q9NNW7 524 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 KLC4Q9NSK0 619 aa11.39□□□□□ -0.59
ABCF1-201ENST00000326195 ZBTB5O15062 677 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 FSBPO95073 299 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 GCFC2P16383 781 aaKnown RBP11.38□□□□□ -0.59
ABCF1-201ENST00000326195 CASP14P31944 242 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 ERVK-24P63145 666 aa11.38□□□□□ -0.59
ABCF1-201ENST00000326195 MAP2K1Q02750 393 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-201ENST00000326195 APTXQ7Z2E3 356 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms