RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PFKFB1P16118 471 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 ANKRD36BP1Q96IX9 119 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 FGFR1OP2Q9NVK5 253 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 MED23Q9ULK4 1368 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 HNRNPCP07910 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
PCF11-201ENST00000298281 DDIT3P35638 169 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 TECP42680 631 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 PNOCQ13519 176 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 PPM1KQ8N3J5 372 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 TESK2Q96S53 571 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 ATP10BO94823 1461 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 GAP43P17677 238 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 MFAP3P55082 362 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 CDHR1Q96JP9 859 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 GOLGA8RI6L899 631 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 IFNL3Q8IZI9 196 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 C7orf31Q8N865 590 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 RETREG2Q8NC44 543 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
PCF11-201ENST00000298281 ZMYM3Q14202 1370 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 CIITAP33076 1130 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 ADAM9Q13443 819 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 EXOC3L4Q17RC7 722 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 ACCSLQ4AC99 568 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 PLA2G4DQ86XP0 818 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 SUN1O94901 812 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 SPOPLQ6IQ16 392 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 TRMT44Q8IYL2 757 aaKnown RBP12.98□□□□□ -0.33
PCF11-201ENST00000298281 CCHCR1Q8TD31 782 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 ZBTB18Q99592 522 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 ING2Q9H160 280 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 USP19O94966 1318 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 SEMA3EO15041 775 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 TOM1L1O75674 476 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 IL9RQ01113 521 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 TMC4Q7Z404 712 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 ARHGAP18Q8N392 663 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 FAM149B1Q96BN6 582 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 CACNA2D2Q9NY47 1150 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 TTI1O43156 1089 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 SNX2O60749 519 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 MYL1P05976 194 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 HSPA6P17066 643 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 NNMTP40261 264 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 ICA1Q05084 483 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 FAM173BQ6P4H8 233 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 DNAJC10Q8IXB1 793 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 YAF2Q8IY57 180 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 PBXIP1Q96AQ6 731 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 DYRK4Q9NR20 520 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 FARP1Q9Y4F1 1045 aaPredicted RBP12.98□□□□□ -0.33
PCF11-201ENST00000298281 COL17A1Q9UMD9 1497 aaPredicted RBP12.98□□□□□ -0.33
PCF11-201ENST00000298281 CFLARO15519 480 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 PFKFB2O60825 505 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 L3MBTL3Q96JM7 780 aaPredicted RBP12.98□□□□□ -0.33
PCF11-201ENST00000298281 NT5C1BQ96P26 610 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 CCDC90BQ9GZT6 254 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 JRKLQ9Y4A0 524 aa12.98□□□□□ -0.33
PCF11-201ENST00000298281 GCFC2P16383 781 aaKnown RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 PAMP19021 973 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 PCYT1AP49585 367 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 NT5C2P49902 561 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 NEK2P51955 445 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 ASPRV1Q53RT3 343 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 RWDD4Q6NW29 188 aaKnown RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 ZBTB38Q8NAP3 1195 aaPredicted RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 COPRSQ9NQ92 184 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 ADD3Q9UEY8 706 aaKnown RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 JAK2O60674 1132 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 SERPIND1P05546 499 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 GOLGA8FQ08AF8 430 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 GOLGA8DPQ0D2H9 430 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 DCAF4L1Q3SXM0 396 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 FAM47AQ5JRC9 791 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 PLXNC1O60486 1568 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 ZMYM4Q5VZL5 1548 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 RPN1P04843 607 aaKnown RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 VCAM1P19320 739 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 ETF1P62495 437 aaKnown RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 MRFAP1L1Q96HT8 127 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 SARS2Q9NP81 518 aaKnown RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 ZNF280CQ8ND82 737 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 NACC1Q96RE7 527 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 AMNQ9BXJ7 453 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 SMARCAD1Q9H4L7 1026 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 SEPT9Q9UHD8 586 aaPredicted RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 G3BP2Q9UN86 482 aaKnown RBP12.97□□□□□ -0.33
PCF11-201ENST00000298281 INSRP06213 1382 aa12.97□□□□□ -0.33
PCF11-201ENST00000298281 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms