RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Acot6Q32Q92 419 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Trim43aQ3TL54 445 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Ccdc25Q78PG9 208 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Hirip3Q8BLH7 601 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Alg1Q921Q3 482 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Syce1Q9D495 329 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Eid1Q9DCR4 169 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 Myh8P13542 1937 aa17.77■□□□□ 0.44
Trim28-201ENSMUST00000005705 1700018F24RikB2RW27 314 aa17.77■□□□□ 0.43
Trim28-201ENSMUST00000005705 AoahO35298 574 aa17.77■□□□□ 0.43
Trim28-201ENSMUST00000005705 Sema6bO54951 886 aa17.77■□□□□ 0.43
Trim28-201ENSMUST00000005705 AdkP55264 361 aa17.77■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ift20Q61025 132 aa17.77■□□□□ 0.43
Trim28-201ENSMUST00000005705 Mettl25Q6NXH8 597 aa17.77■□□□□ 0.43
Trim28-201ENSMUST00000005705 Krt79Q8VED5 531 aa17.77■□□□□ 0.43
Trim28-201ENSMUST00000005705 Bpifb4A2BGH0 617 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Chrna9G3X8Z7 479 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ddx3xQ62167 662 aaKnown RBP17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Fnbp1Q80TY0 616 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ift74Q8BKE9 600 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Calhm4Q8CE93 315 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ubxn6Q99PL6 442 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Efhd1Q9D4J1 240 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Mcm5P49718 733 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Sp4Q62445 782 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Wdr44Q6NVE8 915 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 HhatQ8BMT9 499 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Haus2Q9CQS9 234 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 RnmtQ9D0L8 465 aaKnown RBP17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Xirp1O70373 1129 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 CraddO88843 199 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Gap43P06837 227 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 SugctQ7TNE1 436 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Gpr101Q80T62 511 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Haus4Q8BFT2 363 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Rfc4Q99J62 364 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Actn2Q9JI91 894 aa17.76■□□□□ 0.43
Trim28-201ENSMUST00000005705 Dnaaf5B9EJR8 853 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ces1aE9PYP1 563 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Gm8298J3QPI0 401 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Nr2f2P43135 414 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Kcnma1Q08460 1209 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tmprss11aQ3UQ41 389 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 1810065E05RikQ5NC41 235 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tbc1d9bQ5SVR0 1263 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Ces1eQ64176 562 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 DaglaQ6WQJ1 1044 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tmx4Q8C0L0 335 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Emilin2Q8K482 1074 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 PccaQ91ZA3 724 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Gps2Q921N8 327 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 GgcxQ9QYC7 757 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Snapc4Q8BP86 1333 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Dnai2A2AC93 623 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tsg101Q61187 391 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Q8C6G1 249 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Msantd4Q91YU3 345 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tmem192Q9CXT7 266 aa17.75■□□□□ 0.43
Trim28-201ENSMUST00000005705 Skor2A7M7C7 1008 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Aknad1E9Q8N6 675 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Pcdh11xF6ZNL5 1338 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Lig1P37913 916 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Proser2Q8C5R2 471 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Q922C1 641 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Serpinb12Q9D7P9 423 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Sept2P42208 361 aaKnown RBP17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tmtc1Q3UV71 942 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Stxbp3Q60770 592 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Hdac10Q6P3E7 666 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Tlr13Q6R5N8 991 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 CgasQ8C6L5 507 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 CnstQ8CBC4 711 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Bbs7Q8K2G4 715 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Mtmr4Q91XS1 1190 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Trmt44Q9D2Q2 713 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Sstr3P30935 428 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Lrrfip1Q3UZ39 729 aaKnown RBP17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 EsrrbQ61539 433 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Kcnj11Q61743 390 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Celf4Q7TSY6 486 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Strip1Q8C079 837 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Cyp2s1Q9DBX6 501 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Slc40a1Q9JHI9 570 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 PigoQ9JJI6 1093 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Myl7Q9QVP4 175 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Prkab1Q9R078 270 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 SufuQ9Z0P7 484 aa17.74■□□□□ 0.43
Trim28-201ENSMUST00000005705 Sh3gl2Q62420 352 aa17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 Eif3hQ91WK2 352 aaKnown RBP17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 Entpd5Q9WUZ9 427 aa17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 Rgl1Q60695 768 aa17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 GartQ64737 1010 aa17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 Pak2Q8CIN4 524 aa17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 Spc24Q9D083 201 aa17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 Lman1Q9D0F3 517 aa17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 TbcbQ9D1E6 244 aa17.73■□□□□ 0.43
Trim28-201ENSMUST00000005705 Kif13bA0A286YCV9 1847 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Vmn2r68L7N2B3 851 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 Cacna2d1O08532 1103 aa17.72■□□□□ 0.43
Trim28-201ENSMUST00000005705 XlrP05531 208 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms