RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	PHO86	P46956	311 aa		6.26	□□□□□ -1.41
TIF1	YKR059W	ECL1	P48235	211 aa		6.26	□□□□□ -1.41
TIF1	YKR059W	PRP24	P49960	444 aa	Known RBP	6.26	□□□□□ -1.41
TIF1	YKR059W	ATG4	P53867	494 aa		6.26	□□□□□ -1.41
TIF1	YKR059W	EFM6	P53970	246 aa		6.26	□□□□□ -1.41
TIF1	YKR059W	SIL1	Q08199	421 aa		6.26	□□□□□ -1.41
TIF1	YKR059W	PER33	Q12144	273 aa		6.26	□□□□□ -1.41
TIF1	YKR059W	INP53	Q12271	1107 aa		6.26	□□□□□ -1.41
TIF1	YKR059W	YDR061W	Q12298	539 aa		6.26	□□□□□ -1.41
TIF1	YKR059W	RAD3	P06839	778 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	DAL2	P25335	343 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	IMG1	P25626	169 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	BUD14	P27637	709 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	MRPL9	P31334	269 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	SSE1	P32589	693 aa	Known RBP	6.25	□□□□□ -1.41
TIF1	YKR059W	GND1	P38720	489 aa	Known RBP	6.25	□□□□□ -1.41
TIF1	YKR059W	FET5	P43561	622 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	STB2	P46679	850 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	YGR149W	P48236	432 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	MNN10	P50108	393 aa	Known RBP	6.25	□□□□□ -1.41
TIF1	YKR059W	RNT1	Q02555	471 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	YPL113C	Q02961	396 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	MGR3	Q04472	501 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	YOL075C	Q08234	1294 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	RPN8	Q08723	338 aa	Known RBP	6.25	□□□□□ -1.41
TIF1	YKR059W	SRO7	Q12038	1033 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	MED2	Q12124	431 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	TAF3	Q12297	353 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	ISN1	Q99312	450 aa		6.25	□□□□□ -1.41
TIF1	YKR059W	GAL4	P04386	881 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	RPL1A	P0CX43	217 aa	Known RBP	6.24	□□□□□ -1.41
TIF1	YKR059W	RPL1B	P0CX44	217 aa	Known RBP	6.24	□□□□□ -1.41
TIF1	YKR059W	PUT4	P15380	627 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	ART10	P18634	518 aa	Known RBP	6.24	□□□□□ -1.41
TIF1	YKR059W	PMI40	P29952	429 aa	Known RBP	6.24	□□□□□ -1.41
TIF1	YKR059W	HXT3	P32466	567 aa	Known RBP	6.24	□□□□□ -1.41
TIF1	YKR059W	YEL043W	P32618	956 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	UGP1	P32861	499 aa	Known RBP	6.24	□□□□□ -1.41
TIF1	YKR059W	LST4	P34239	828 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	MNN2	P38069	597 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	SLM4	P38247	162 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	ECM10	P39987	644 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	TIF34	P40217	347 aa	Known RBP	6.24	□□□□□ -1.41
TIF1	YKR059W	ARG2	P40360	574 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	ASG7	P46993	209 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	PEX31	P53203	462 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	SWS2	P53937	143 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	GRX8	Q05926	109 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	YAP7	Q08182	245 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	FRE3	Q08905	711 aa		6.24	□□□□□ -1.41
TIF1	YKR059W	RTC5	Q12108	567 aa	Known RBP	6.24	□□□□□ -1.41
TIF1	YKR059W	ILV2	P07342	687 aa	Known RBP	6.23	□□□□□ -1.41
TIF1	YKR059W	AMD2	P22580	549 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	ERG4	P25340	473 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	BOS1	P25385	244 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	DAL80	P26343	269 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	PSO2	P30620	661 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	TUL1	P36096	758 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	VBA2	P38358	474 aa	Known RBP	6.23	□□□□□ -1.41
TIF1	YKR059W	MUP3	P38734	546 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	BDH2	P39713	417 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	PHM8	P40025	321 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	RTT105	P40063	208 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	PMT6	P42934	759 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	SNF12	P53628	566 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	PRM1	P53835	661 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	SKO1	Q02100	647 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	TRM82	Q03774	444 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	ERV41	Q04651	352 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	AIM39	Q08223	395 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	ETT1	Q08421	412 aa	Known RBP	6.23	□□□□□ -1.41
TIF1	YKR059W	AEP3	Q12089	606 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	YLR046C	Q12253	270 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	HER1	Q12276	1246 aa		6.23	□□□□□ -1.41
TIF1	YKR059W	CDC33	P07260	213 aa	Known RBP	6.22	□□□□□ -1.41
TIF1	YKR059W	RIP1	P08067	215 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	SEC63	P14906	663 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	DAL81	P21657	970 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	YSP3	P25036	478 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	GEX1	P25596	615 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	TIF3	P34167	436 aa	Known RBP	6.22	□□□□□ -1.41
TIF1	YKR059W	KAP104	P38217	918 aa	Known RBP	6.22	□□□□□ -1.41
TIF1	YKR059W	MSR1	P38714	643 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	PRM9	P39551	298 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	DSN1	P40568	576 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	YPS6	P40583	537 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	STU2	P46675	888 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	RIM8	P53179	542 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	YTP1	P53584	459 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	AQR1	P53943	586 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	EBS1	Q03466	884 aa	Known RBP	6.22	□□□□□ -1.41
TIF1	YKR059W	PLM2	Q04383	521 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
TIF1	YKR059W	MDY2	Q12285	212 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	LAS17	Q12446	633 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	YDL007C-A	Q2V2Q0	85 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	TFB5	Q3E7C1	72 aa	Predicted RBP	6.22	□□□□□ -1.41
TIF1	YKR059W	HFA1	P32874	2273 aa		6.22	□□□□□ -1.41
TIF1	YKR059W	ALG7	P07286	448 aa		6.21	□□□□□ -1.42
TIF1	YKR059W	SNU114	P36048	1008 aa	Known RBP	6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms