RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHQ1	YIL104C	RRN10	P38204	145 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	GDT1	P38301	280 aa	Predicted RBP	3.2	□□□□□ -1.9
SHQ1	YIL104C	GIC1	P38785	314 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	YHR219W	P38900	624 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	MEP2	P41948	499 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	PRM10	P42946	383 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	RNR4	P49723	345 aa	Known RBP	3.2	□□□□□ -1.9
SHQ1	YIL104C	SAM37	P50110	327 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	MUP1	P50276	574 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	USE1	P53146	245 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	TRS23	Q03784	219 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	YLR413W	Q06689	675 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	RXT3	Q07458	294 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	DIA2	Q08496	732 aa	Predicted RBP	3.2	□□□□□ -1.9
SHQ1	YIL104C	RPN8	Q08723	338 aa	Known RBP	3.2	□□□□□ -1.9
SHQ1	YIL104C	MMT2	Q08970	484 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	YDR056C	Q12025	205 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	ATG29	Q12092	213 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	YDR061W	Q12298	539 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	FRE7	Q12333	620 aa		3.2	□□□□□ -1.9
SHQ1	YIL104C	ACC1	Q00955	2233 aa	Known RBP	3.2	□□□□□ -1.9
SHQ1	YIL104C	MDM35	O60200	86 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	TYR1	P20049	452 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	IMG1	P25626	169 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	SIN4	P32259	974 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	ATO2	P32907	282 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	PET112	P33893	541 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	RIP-Chip
SHQ1	YIL104C	MUM2	P38236	366 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YBR238C	P38330	731 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	ARN1	P38731	627 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	MNL1	P38888	796 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	ARB1	P40024	610 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	CAB2	P40506	365 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	PMT4	P46971	762 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	ROG1	P53118	685 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	RTS3	P53289	263 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YGR266W	P53326	701 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	ESF2	P53743	316 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	CUS2	P53830	285 aa	Predicted RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	YNL260C	P53846	198 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	REC102	Q02721	264 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YDR338C	Q05497	695 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	RRP40	Q08285	240 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	YPR202W	Q08993	238 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	MLH3	Q12083	715 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	NTO1	Q12311	748 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	GLE1	Q12315	538 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YCL012C	Q8J0M4	134 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	SRN2	Q99176	213 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	ATP6	P00854	259 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	ARG81	P05085	880 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	KAR1	P11927	433 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	RSR1	P13856	272 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	NMT1	P14743	455 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YAP1	P19880	650 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	PRP4	P20053	465 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	SAN1	P22470	610 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	STP22	P25604	385 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	SYP1	P25623	870 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	ARE1	P25628	610 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	PHO91	P27514	894 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	ADE1	P27616	306 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	PDB1	P32473	366 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	CDC5	P32562	705 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	PDR3	P33200	976 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	WBP1	P33767	430 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	COS111	P38308	924 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	HPM1	P40481	377 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YIL086C	P40503	102 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	PSA1	P41940	361 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	AIM22	P47051	409 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	IMA1	P53051	589 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YGR053C	P53234	283 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	TNA1	P53322	534 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	PRO2	P54885	456 aa	Known RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	PRP38	Q00723	242 aa	Predicted RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	SED5	Q01590	340 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YPL109C	Q02981	657 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	MUS81	Q04149	632 aa	Predicted RBP	3.19	□□□□□ -1.9
SHQ1	YIL104C	DIC1	Q06143	298 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YDL121C	Q07541	149 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YLR030W	Q07967	263 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	YOL159C	Q08300	171 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	IRC13	Q08630	104 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	NMD4	Q12129	218 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	HUA2	Q12134	243 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	MCD1	Q12158	566 aa		3.19	□□□□□ -1.9
SHQ1	YIL104C	ARD1	P07347	238 aa	Predicted RBP	3.18	□□□□□ -1.9
SHQ1	YIL104C	TY2A-LR1	P0C2J4	438 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	TY2A-F	P0CX61	438 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	TY2A-GR2	P0CX62	438 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	STE4	P18851	423 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	PRI2	P20457	528 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	DAL82	P21705	255 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	PTP1	P25044	335 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	TY2A-C	P25383	438 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	SPB1	P25582	841 aa	Predicted RBP	3.18	□□□□□ -1.9
SHQ1	YIL104C	DGR2	P32330	852 aa		3.18	□□□□□ -1.9
SHQ1	YIL104C	YMC1	P32331	307 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms