RNA–Protein interactions for RNA: YBR035C

PDX3, Transcript of Pyridoxine (pyridoxamine) phosphate oxidase, yeast

Gene PDX3, Length 687 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDX3	YBR035C	YNL092W	P53934	400 aa		4.64	□□□□□ -1.67
PDX3	YBR035C	TRS23	Q03784	219 aa		4.64	□□□□□ -1.67
PDX3	YBR035C	PPM1	Q04081	328 aa		4.64	□□□□□ -1.67
PDX3	YBR035C	GFD1	Q04839	188 aa	Known RBP	4.64	□□□□□ -1.67
PDX3	YBR035C	YML053C	Q04978	212 aa		4.64	□□□□□ -1.67
PDX3	YBR035C	RRP45	Q05636	305 aa	Known RBP	4.64	□□□□□ -1.67
PDX3	YBR035C	YAP7	Q08182	245 aa		4.64	□□□□□ -1.67
PDX3	YBR035C	INP53	Q12271	1107 aa		4.64	□□□□□ -1.67
PDX3	YBR035C	YDL007C-A	Q2V2Q0	85 aa		4.64	□□□□□ -1.67
PDX3	YBR035C	FAB1	P34756	2278 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	COX4	P04037	155 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	DAP2	P18962	818 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	PUP3	P25451	205 aa	Known RBP	4.63	□□□□□ -1.67
PDX3	YBR035C	MEI5	P32489	222 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	SNU114	P36048	1008 aa	Known RBP	4.63	□□□□□ -1.67
PDX3	YBR035C	RSM22	P36056	628 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	DRE2	P36152	348 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	ECM10	P39987	644 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	PHM8	P40025	321 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	CHS6	P40955	746 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	URB2	P47108	1174 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	ASN1	P49089	572 aa	Known RBP	4.63	□□□□□ -1.67
PDX3	YBR035C	ORC5	P50874	479 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	SKO1	Q02100	647 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	MUK1	Q02866	612 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	EBS1	Q03466	884 aa	Known RBP	4.63	□□□□□ -1.67
PDX3	YBR035C	WAR1	Q03631	944 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	RTN1	Q04947	295 aa	Known RBP	4.63	□□□□□ -1.67
PDX3	YBR035C	ECM7	Q06200	448 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	LEU9	Q12166	604 aa	Known RBP	4.63	□□□□□ -1.67
PDX3	YBR035C	LCB4	Q12246	624 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	ZPS1	Q12512	249 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.63	□□□□□ -1.67
PDX3	YBR035C	DFG16	Q99234	619 aa		4.63	□□□□□ -1.67
PDX3	YBR035C	YLR422W	Q06409	1932 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	ADE4	P04046	510 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	RPS3	P05750	240 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	RPS13	P05756	151 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	CDC37	P06101	506 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	ILV2	P07342	687 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	SRV2	P17555	526 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	GLN3	P18494	730 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	STE4	P18851	423 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	MGM101	P32787	269 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	LST4	P34239	828 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	RPC25	P35718	212 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	YET1	P35723	206 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	MRPL10	P36520	322 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	PCH2	P38126	564 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	ICS2	P38284	255 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	VBA2	P38358	474 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	ASG1	P40467	964 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	GCN20	P43535	752 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	PTR3	P43606	678 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	STU2	P46675	888 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	APT1	P49435	187 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	YGR067C	P53243	804 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	COG2	P53271	262 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	PRO2	P54885	456 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	TIM8	P57744	87 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	AAT1	Q01802	451 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	RPM2	Q02773	1202 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	ACL4	Q03771	387 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	HCR1	Q05775	265 aa	Known RBP	4.62	□□□□□ -1.67
PDX3	YBR035C	TMA10	Q06177	86 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	SHS1	Q07657	551 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	SIL1	Q08199	421 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	ATG9	Q12142	997 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	YDR061W	Q12298	539 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	TRM13	Q12383	476 aa		4.62	□□□□□ -1.67
PDX3	YBR035C	JIP3	O13555	125 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	RPL4A	P10664	362 aa	Known RBP	4.61	□□□□□ -1.67
PDX3	YBR035C	URA4	P20051	364 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	YJU2	P28320	278 aa	Predicted RBP	4.61	□□□□□ -1.67
PDX3	YBR035C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
PDX3	YBR035C	MUD1	P32605	298 aa	Known RBP	4.61	□□□□□ -1.67
PDX3	YBR035C	GDA1	P32621	518 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	SKG6	P32900	734 aa	Predicted RBP	4.61	□□□□□ -1.67
PDX3	YBR035C	SRB2	P34162	210 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	MRX3	P38172	270 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	MMS4	P38257	691 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	ELO1	P39540	310 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	SER3	P40054	469 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	YTA12	P40341	825 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	YJL132W	P47014	750 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	COS5	P47187	383 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	BUL1	P48524	976 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	RPL4B	P49626	362 aa	Known RBP	4.61	□□□□□ -1.67
PDX3	YBR035C	MIG2	P53035	382 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	ATG4	P53867	494 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	TOF2	Q02208	771 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	SPO19	Q03029	223 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	COS7	Q07788	383 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	RRT8	Q08219	342 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	AEP3	Q12089	606 aa		4.61	□□□□□ -1.67
PDX3	YBR035C	SPO7	P18410	259 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	AFG1	P32317	509 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	ZUO1	P32527	433 aa	Known RBP	4.6	□□□□□ -1.67
PDX3	YBR035C	YHL026C	P38740	315 aa		4.6	□□□□□ -1.67
PDX3	YBR035C	GIP4	P39732	760 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms