RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 REXO1Q8N1G1 1221 aaKnown RBP19.45■□□□□ 0.7
PHGDH-234ENST00000642041 MICALL1Q8N3F8 863 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 CUL5Q93034 780 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 TSEN34Q9BSV6 310 aaKnown RBP19.45■□□□□ 0.7
PHGDH-234ENST00000642041 MAF1Q9H063 256 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 KIAA1683Q9H0B3 1180 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 ANO10Q9NW15 660 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 HPSEQ9Y251 543 aa19.45■□□□□ 0.7
PHGDH-234ENST00000642041 M0R2N6 131 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 ZNF202O95125 648 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 GOLGA8HP0CJ92 632 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 XRCC6P12956 609 aaKnown RBP eCLIP19.44■□□□□ 0.75e-6■■□□□ 11.5
PHGDH-234ENST00000642041 GCFC2P16383 781 aaKnown RBP19.44■□□□□ 0.7
PHGDH-234ENST00000642041 NPY5RQ15761 445 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 CT47A1Q5JQC4 288 aaPredicted RBP19.44■□□□□ 0.7
PHGDH-234ENST00000642041 ADGRF4Q8IZF3 695 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 ABRAQ8N0Z2 381 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 MAML3Q96JK9 1138 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 AK8Q96MA6 479 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 PIGSQ96S52 555 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 AMNQ9BXJ7 453 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 GTPBP4Q9BZE4 634 aaKnown RBP19.44■□□□□ 0.7
PHGDH-234ENST00000642041 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 VCPKMTQ9H867 229 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 JMJD4Q9H9V9 463 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 RIC8AQ9NPQ8 531 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 STARD7Q9NQZ5 370 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 MTMR7Q9Y216 660 aa19.44■□□□□ 0.7
PHGDH-234ENST00000642041 PRRC2BQ5JSZ5 2229 aaKnown RBP19.44■□□□□ 0.7
PHGDH-234ENST00000642041 SLC26A4O43511 780 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 RAD21O60216 631 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 CSF2RAP15509 400 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 ERCC3P19447 782 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 AP3B2Q13367 1082 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 SKIV2LQ15477 1246 aaKnown RBP19.43■□□□□ 0.7
PHGDH-234ENST00000642041 PIK3AP1Q6ZUJ8 805 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 SIAH1Q8IUQ4 282 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 TMEM199Q8N511 208 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 SPATC1LQ9H0A9 340 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 KCNH3Q9ULD8 1083 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 PCDHA6Q9UN73 950 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 YBX2Q9Y2T7 364 aaKnown RBP19.43■□□□□ 0.7
PHGDH-234ENST00000642041 PCDHA8Q9Y5H6 950 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 STK24Q9Y6E0 443 aa19.43■□□□□ 0.7
PHGDH-234ENST00000642041 A0A1W2PRG0 241 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 FAM86C2PA6NEL3 165 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 TLL1O43897 1013 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 NDUFB10O96000 172 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 ACRP10323 421 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 NEK8Q86SG6 692 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 GAS2L3Q86XJ1 694 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 HOMER1Q86YM7 354 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 FAM200AQ8TCP9 573 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 ACER1Q8TDN7 264 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 OXER1Q8TDS5 423 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 FUCA2Q9BTY2 467 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 RPAP3Q9H6T3 665 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-234ENST00000642041 VAT1LQ9HCJ6 419 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 GPCPD1Q9NPB8 672 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 HOXC10Q9NYD6 342 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 FBXO2Q9UK22 296 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-234ENST00000642041 FEM1BQ9UK73 627 aa19.42■□□□□ 0.7
PHGDH-234ENST00000642041 MYL1P05976 194 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 PFKFB1P16118 471 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 MARCKSP29966 332 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-234ENST00000642041 STAT2P52630 851 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 ACLYP53396 1101 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 STX1AQ16623 288 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 SYDE2Q5VT97 1194 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 MOXD1Q6UVY6 613 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 KHSRPQ92945 711 aaKnown RBP eCLIP19.41■□□□□ 0.7
PHGDH-234ENST00000642041 UBA5Q9GZZ9 404 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 MTIF3Q9H2K0 278 aaKnown RBP19.41■□□□□ 0.7
PHGDH-234ENST00000642041 MROH8Q9H579 483 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 COG5Q9UP83 839 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 PCDHB6Q9Y5E3 794 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 MROH7Q68CQ1 1323 aa19.41■□□□□ 0.7
PHGDH-234ENST00000642041 GBF1Q92538 1859 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 A0A1B0GVL5 298 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 MOXD2PA6NHM9 499 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 PI4K2BG5E9Z4 385 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 WDR46O15213 610 aaKnown RBP19.4■□□□□ 0.7
PHGDH-234ENST00000642041 ADAMTS4O75173 837 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 POU3F3P20264 500 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-234ENST00000642041 USP11P51784 963 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 NDUFA8P51970 172 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 COG2Q14746 738 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 DTHD1Q6ZMT9 781 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 FBXO11Q86XK2 927 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 TRIML1Q8N9V2 468 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 FTOQ9C0B1 505 aaKnown RBP eCLIP19.4■□□□□ 0.7
PHGDH-234ENST00000642041 PSTPIP2Q9H939 334 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 EHMT1Q9H9B1 1298 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 MAP3K20Q9NYL2 800 aaKnown RBP19.4■□□□□ 0.7
PHGDH-234ENST00000642041 KIAA1468Q9P260 1216 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 DACH1Q9UI36 760 aa19.4■□□□□ 0.7
PHGDH-234ENST00000642041 hCG_1642624A0A1W2PR95 340 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 TPM4P67936 248 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 TYRO3Q06418 890 aa19.39■□□□□ 0.69
PHGDH-234ENST00000642041 PTGDRQ13258 359 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms