RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 CSRNP2Q9H175 543 aa11.57□□□□□ -0.56
PHGDH-224ENST00000641711 ABHD16BQ9H3Z7 469 aa11.57□□□□□ -0.56
PHGDH-224ENST00000641711 VTA1Q9NP79 307 aa11.57□□□□□ -0.56
PHGDH-224ENST00000641711 RPTORQ8N122 1335 aa11.57□□□□□ -0.56
PHGDH-224ENST00000641711 HTTP42858 3142 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 SPDYE3A6NKU9 549 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 MEIS2O14770 477 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 ACTN4O43707 911 aaKnown RBP11.56□□□□□ -0.56
PHGDH-224ENST00000641711 INHAP05111 366 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 CYBAP13498 195 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 TPM4P67936 248 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 CNTN2Q02246 1040 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 NCAPHQ15003 741 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 COL13A1Q5TAT6 717 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-224ENST00000641711 ARL6IP4Q66PJ3 421 aaKnown RBP11.56□□□□□ -0.56
PHGDH-224ENST00000641711 ARMCX2Q7L311 632 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 REXO1Q8N1G1 1221 aaKnown RBP11.56□□□□□ -0.56
PHGDH-224ENST00000641711 AOPEPQ8N6M6 819 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 TRIML1Q8N9V2 468 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 SPATA20Q8TB22 786 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 RMDN3Q96TC7 470 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 PYM1Q9BRP8 204 aaKnown RBP11.56□□□□□ -0.56
PHGDH-224ENST00000641711 HMX1Q9NP08 348 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-224ENST00000641711 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 SPTLC3Q9NUV7 552 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
PHGDH-224ENST00000641711 A0A087WWV3 80 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 SOWAHBA6NEL2 793 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 SMCO2A6NFE2 343 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 WNT7AO00755 349 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 POLR2DO15514 142 aaKnown RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 ELNP15502 786 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 TAL1P17542 331 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 ATP2B1P20020 1258 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 TERF1P54274 439 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 PTGDRQ13258 359 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 PNOCQ13519 176 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 POSTNQ15063 836 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 ZNF174Q15697 407 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 CCL14Q16627 93 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 CT47A1Q5JQC4 288 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 ARHGEF16Q5VV41 709 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 PIK3AP1Q6ZUJ8 805 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 SH3RF1Q7Z6J0 888 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 C4orf32Q8N8J7 132 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 PDCD2LQ9BRP1 358 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 KCNF1Q9H3M0 494 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 TTC12Q9H892 705 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 FLRT1Q9NZU1 646 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 BIN2Q9UBW5 565 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-224ENST00000641711 SERTAD1Q9UHV2 236 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 PCDHA5Q9Y5H7 936 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 ASTN1O14525 1302 aa11.55□□□□□ -0.56
PHGDH-224ENST00000641711 SEPT4O43236 478 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 SLFN14P0C7P3 912 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 AKR1A1P14550 325 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 CCND2P30279 289 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 CACNB2Q08289 660 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-224ENST00000641711 PDE4DQ08499 809 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 STXBP2Q15833 593 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 SPECC1Q5M775 1068 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 MLKLQ8NB16 471 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 KIAA1524Q8TCG1 905 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 ZNF830Q96NB3 372 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-224ENST00000641711 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.54□□□□□ -0.56
PHGDH-224ENST00000641711 PAK6Q9NQU5 681 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-224ENST00000641711 COL20A1Q9P218 1284 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 MAN1B1Q9UKM7 699 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 PCDHA6Q9UN73 950 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 PCDHA8Q9Y5H6 950 aa11.54□□□□□ -0.56
PHGDH-224ENST00000641711 RBM47A0AV96 593 aaKnown RBP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 BIN1O00499 593 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 LAD1O00515 517 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 NKRFO15226 690 aaKnown RBP eCLIP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 NEMFO60524 1076 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 EIF3JO75822 258 aaKnown RBP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 SMC2O95347 1197 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 SNAI1O95863 264 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 GJB1P08034 283 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 NR3C2P08235 984 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 PTGS1P23219 599 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 HOXA13P31271 388 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 CYP2C19P33261 490 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 LONP1P36776 959 aaKnown RBP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 SREBF1P36956 1147 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 MYL5Q02045 173 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 ORC2Q13416 577 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 ACVR2BQ13705 512 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 MORC3Q14149 939 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 DHX8Q14562 1220 aaKnown RBP11.53□□□□□ -0.56
PHGDH-224ENST00000641711 PGM5Q15124 567 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 GNPTABQ3T906 1256 aa11.53□□□□□ -0.56
PHGDH-224ENST00000641711 PCNX4Q63HM2 1172 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms