RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CCDC174Q6PII3 467 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 EPM2AIP1Q7L775 607 aaPredicted RBP7.42□□□□□ -1.22
RTTN-215ENST00000639487 NLRX1Q86UT6 975 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 FBXO11Q86XK2 927 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 SCFD2Q8WU76 684 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 COA7Q96BR5 231 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 VWCEQ96DN2 955 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 NEUROD6Q96NK8 337 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 FAM184BQ9ULE4 1060 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 DOCK3Q8IZD9 2030 aa7.42□□□□□ -1.22
RTTN-215ENST00000639487 ZBTB42B2RXF5 422 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 POLR3DP05423 398 aaPredicted RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 LINC00271P0C7V0 271 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 NCKAP1LP55160 1127 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 TRDNQ13061 729 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 MAMSTRQ6ZN01 415 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 CNNM3Q8NE01 707 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 TRPV1Q8NER1 839 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 ANP32BQ92688 251 aaKnown RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 HSD17B14Q9BPX1 270 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 LNPKQ9C0E8 428 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 OLFML3Q9NRN5 406 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 ZMYM5Q9UJ78 669 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 RCOR1Q9UKL0 485 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 FARP2O94887 1054 aaPredicted RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 STAT3P40763 770 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 TDO2P48775 406 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 RPL34P49207 117 aaKnown RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 ZNF157P51786 506 aaPredicted RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 MTMR2Q13614 643 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 GSE1Q14687 1217 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 RTN1Q16799 776 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 SERINC5Q86VE9 423 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 MAPKAPK5Q8IW41 473 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 CD302Q8IX05 232 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 CMASQ8NFW8 434 aaPredicted RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 IQCDQ96DY2 449 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 P2RX7Q99572 595 aaKnown RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 C6orf50Q9HD87 102 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 UBN1Q9NPG3 1134 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 A1CFQ9NQ94 594 aaKnown RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 FRAT2O75474 233 aaPredicted RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 POTEIP0CG38 1075 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 POTEJP0CG39 1038 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 FOXD4L6Q3SYB3 417 aaPredicted RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 FOXD4L3Q6VB84 417 aaPredicted RBP7.41□□□□□ -1.22
RTTN-215ENST00000639487 KIAA1211Q6ZU35 1233 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 FAM126BQ8IXS8 530 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 TRIML1Q8N9V2 468 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 ARRDC4Q8NCT1 418 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 MMP19Q99542 508 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 C16orf70Q9BSU1 422 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 MXD3Q9BW11 206 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 PDCL3Q9H2J4 239 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 PCDHAC2Q9Y5I4 1007 aa7.41□□□□□ -1.22
RTTN-215ENST00000639487 NRCAMQ92823 1304 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 POTEFA5A3E0 1075 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 G3V3G9 751 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 FOXN1O15353 648 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 ST18O60284 1047 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 IDH1O75874 414 aaKnown RBP7.4□□□□□ -1.22
RTTN-215ENST00000639487 CAVIN2O95810 425 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 AARSP49588 968 aaKnown RBP eCLIP7.4□□□□□ -1.22
RTTN-215ENST00000639487 SCRN1Q12765 414 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 E2F4Q16254 413 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 QRICH1Q2TAL8 776 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 DCAF8Q5TAQ9 597 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 WWC2Q6AWC2 1192 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 TAF2Q6P1X5 1199 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 AFG1LQ8WV93 481 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 LEO1Q8WVC0 666 aaPredicted RBP7.4□□□□□ -1.22
RTTN-215ENST00000639487 PAWRQ96IZ0 340 aaKnown RBP7.4□□□□□ -1.22
RTTN-215ENST00000639487 DHX33Q9H6R0 707 aaKnown RBP7.4□□□□□ -1.22
RTTN-215ENST00000639487 RRAGDQ9NQL2 400 aaPredicted RBP7.4□□□□□ -1.22
RTTN-215ENST00000639487 FBXL5Q9UKA1 691 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 CEP131Q9UPN4 1083 aa7.4□□□□□ -1.22
RTTN-215ENST00000639487 GH1P01241 217 aa7.4□□□□□ -1.23
RTTN-215ENST00000639487 EGFL6Q8IUX8 553 aa7.4□□□□□ -1.23
RTTN-215ENST00000639487 VTI1AQ96AJ9 217 aa7.4□□□□□ -1.23
RTTN-215ENST00000639487 AGBL1Q96MI9 1066 aa7.4□□□□□ -1.23
RTTN-215ENST00000639487 FTHL17Q9BXU8 183 aa7.4□□□□□ -1.23
RTTN-215ENST00000639487 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.4□□□□□ -1.23
RTTN-215ENST00000639487 SRPRBQ9Y5M8 271 aaKnown RBP7.4□□□□□ -1.23
RTTN-215ENST00000639487 IRAK3Q9Y616 596 aa7.4□□□□□ -1.23
RTTN-215ENST00000639487 C2orf16Q68DN1 1984 aa7.4□□□□□ -1.23
RTTN-215ENST00000639487 TCF20Q9UGU0 1960 aaKnown RBP7.4□□□□□ -1.23
RTTN-215ENST00000639487 ERICH2A1L162 156 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 GCOM1H8Y6P7 765 aaPredicted RBP7.39□□□□□ -1.23
RTTN-215ENST00000639487 K7ELQ4 463 aaPredicted RBP7.39□□□□□ -1.23
RTTN-215ENST00000639487 POLR2MP0CAP2 368 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 XBP1P17861 261 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 ARL2P36404 184 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 PURAQ00577 322 aaKnown RBP7.39□□□□□ -1.23
RTTN-215ENST00000639487 CREMQ03060 361 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 BEND5Q7L4P6 421 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 SRGAP1Q7Z6B7 1085 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 P2RX5Q93086 422 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 SGSM3Q96HU1 749 aa7.39□□□□□ -1.23
RTTN-215ENST00000639487 FBXL18Q96ME1 805 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms