RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 TOP1MTQ969P6 601 aa10.09□□□□□ -0.79
CHD2-212ENST00000627622 C16orf70Q9BSU1 422 aa10.09□□□□□ -0.79
CHD2-212ENST00000627622 PIEZO1Q92508 2521 aa10.09□□□□□ -0.79
CHD2-212ENST00000627622 COL4A6Q14031 1691 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 C17orf102A2RUQ5 167 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 H3BNC9 293 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 H3BRB1 525 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 HOXC8P31273 242 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 SP2Q02086 613 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 TIGD5Q53EQ6 642 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 STAG2Q8N3U4 1231 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 SEPT8Q92599 483 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 MTMR8Q96EF0 704 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 KRT23Q9C075 422 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 TUT1Q9H6E5 874 aaKnown RBP10.08□□□□□ -0.8
CHD2-212ENST00000627622 MLXIPQ9HAP2 919 aa10.08□□□□□ -0.8
CHD2-212ENST00000627622 KLRF2D3W0D1 207 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 ZBTB5O15062 677 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 CAND2O75155 1236 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 UPP2O95045 317 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 SMIM10L2AP0DMW4 78 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 SMIM10L2BP0DMW5 78 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 UBA1P22314 1058 aaKnown RBP10.07□□□□□ -0.8
CHD2-212ENST00000627622 HOXA13P31271 388 aaPredicted RBP10.07□□□□□ -0.8
CHD2-212ENST00000627622 GPM6BQ13491 265 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 IMMTQ16891 758 aaKnown RBP10.07□□□□□ -0.8
CHD2-212ENST00000627622 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
CHD2-212ENST00000627622 TMEM192Q8IY95 271 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 BANK1Q8NDB2 785 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 YME1L1Q96TA2 773 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 UBAC1Q9BSL1 405 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 LNPKQ9C0E8 428 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 RNPEPQ9H4A4 650 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 PCDHA1Q9Y5I3 950 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 C5orf42Q9H799 3197 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 H3BQ06 376 aaPredicted RBP10.07□□□□□ -0.8
CHD2-212ENST00000627622 TREHO43280 583 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 PPP1R11O60927 126 aaPredicted RBP10.07□□□□□ -0.8
CHD2-212ENST00000627622 LGALS2P05162 132 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 CCND2P30279 289 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 CSPP1Q1MSJ5 1256 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 IFIT1BQ5T764 474 aaKnown RBP10.07□□□□□ -0.8
CHD2-212ENST00000627622 IL31RAQ8NI17 732 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.8
CHD2-212ENST00000627622 PABPC5Q96DU9 382 aaKnown RBP10.07□□□□□ -0.8
CHD2-212ENST00000627622 DSCC1Q9BVC3 393 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 USP26Q9BXU7 913 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 CNNM2Q9H8M5 875 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 MAD2L2Q9UI95 211 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 FAM50BQ9Y247 325 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 LOXHD1Q8IVV2 1947 aa10.07□□□□□ -0.8
CHD2-212ENST00000627622 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.06□□□□□ -0.8
CHD2-212ENST00000627622 DCXO43602 365 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 GNAT1P11488 350 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 RRP1P56182 461 aaKnown RBP10.06□□□□□ -0.8
CHD2-212ENST00000627622 TRAF1Q13077 416 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 COL19A1Q14993 1142 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 TCEAL5Q5H9L2 206 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 ALYREFQ86V81 257 aaKnown RBP10.06□□□□□ -0.8
CHD2-212ENST00000627622 APBB2Q92870 758 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 ZFP91Q96JP5 570 aaPredicted RBP10.06□□□□□ -0.8
CHD2-212ENST00000627622 UIMC1Q96RL1 719 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 OSBPL7Q9BZF2 842 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 NSUN3Q9H649 340 aaKnown RBP10.06□□□□□ -0.8
CHD2-212ENST00000627622 DIAPH3Q9NSV4 1193 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 PRKAG3Q9UGI9 489 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 TTC3P53804 2025 aa10.06□□□□□ -0.8
CHD2-212ENST00000627622 WDFY4Q6ZS81 3184 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 PALM3A6NDB9 673 aaPredicted RBP10.05□□□□□ -0.8
CHD2-212ENST00000627622 GCOM1H8Y6P7 765 aaPredicted RBP10.05□□□□□ -0.8
CHD2-212ENST00000627622 HIP1O00291 1037 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 NOP56O00567 594 aaKnown RBP10.05□□□□□ -0.8
CHD2-212ENST00000627622 NCK2O43639 380 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 TRIOO75962 3097 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 CTSHP09668 335 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 POLR2MP0CAP2 368 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 SEC23AQ15436 765 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 EP400NLQ6ZTU2 488 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 FCHSD1Q86WN1 690 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 IFIH1Q9BYX4 1025 aaKnown RBP10.05□□□□□ -0.8
CHD2-212ENST00000627622 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 BCAS3Q9H6U6 928 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 ZNF318Q5VUA4 2279 aa10.05□□□□□ -0.8
CHD2-212ENST00000627622 STAM2O75886 525 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 ICAM3P32942 547 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 ZP2Q05996 745 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 NEDD9Q14511 834 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 GNPTABQ3T906 1256 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 B4GALNT3Q6L9W6 998 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 CYFIP1Q7L576 1253 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 HOMER1Q86YM7 354 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 PLEKHM2Q8IWE5 1019 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 IL17RAQ96F46 866 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 PIGSQ96S52 555 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 RIOX1Q9H6W3 641 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 SETD4Q9NVD3 440 aa10.04□□□□□ -0.8
CHD2-212ENST00000627622 CLDND1Q9NY35 253 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms