RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 FAM83BQ5T0W9 1011 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 AENQ8WTP8 325 aaKnown RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 TBC1D22AQ8WUA7 517 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 MXD3Q9BW11 206 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 TLR10Q9BXR5 811 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 ZHX3Q9H4I2 956 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 BMP2KQ9NSY1 1161 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 TMEM51Q9NW97 253 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 RRP15Q9Y3B9 282 aaKnown RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 ZNF831Q5JPB2 1677 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 TLR2O60603 784 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 SERPINB2P05120 415 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 MRPL12P52815 198 aaKnown RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 ZCWPW2Q504Y3 356 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 HERC4Q5GLZ8 1057 aaPredicted RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 KLHDC7AQ5VTJ3 777 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP17L6PQ6QN14 398 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 PROM2Q8N271 834 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 NOX5Q96PH1 765 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 LSM14BQ9BX40 385 aaKnown RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 RSPH14Q9UHP6 348 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 USP21Q9UK80 565 aa13.03□□□□□ -0.32
C11orf54-215ENST00000617482 GOLGB1Q14789 3259 aaKnown RBP13.03□□□□□ -0.32
C11orf54-215ENST00000617482 POTEB3A0JP26 581 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 POTECB2RU33 542 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 PAFAH1B1P43034 410 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 CLK2P49760 499 aaKnown RBP13.02□□□□□ -0.32
C11orf54-215ENST00000617482 SCNN1DP51172 638 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 SLC9C1Q4G0N8 1177 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 SFMBT2Q5VUG0 894 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 POTEBQ6S5H4 581 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 SRLQ86TD4 932 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.02□□□□□ -0.32
C11orf54-215ENST00000617482 LRRC4BQ9NT99 713 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 RBM12Q9NTZ6 932 aaKnown RBP13.02□□□□□ -0.32
C11orf54-215ENST00000617482 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.32
C11orf54-215ENST00000617482 IGKV6D-41A0A0C4DH26 115 aa13.02□□□□□ -0.33
C11orf54-215ENST00000617482 PJA2O43164 708 aa13.02□□□□□ -0.33
C11orf54-215ENST00000617482 RPS6KA5O75582 802 aa13.02□□□□□ -0.33
C11orf54-215ENST00000617482 STAT3P40763 770 aa13.02□□□□□ -0.33
C11orf54-215ENST00000617482 USP40Q9NVE5 1235 aa13.02□□□□□ -0.33
C11orf54-215ENST00000617482 CEP72Q9P209 647 aa13.02□□□□□ -0.33
C11orf54-215ENST00000617482 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.02□□□□□ -0.33
C11orf54-215ENST00000617482 SSU72P8A0A1W2PR75 194 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 ANKRD65E5RJM6 399 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 ZBTB5O15062 677 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 BBOX1O75936 387 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 FTCDO95954 541 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 PLA2G4BP0C869 781 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 HAUS3Q68CZ6 603 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 ZNF572Q7Z3I7 529 aaPredicted RBP13.01□□□□□ -0.33
C11orf54-215ENST00000617482 GPBP1Q86WP2 473 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 CERKQ8TCT0 537 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 TBC1D5Q92609 795 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 MYH10P35580 1976 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 TOM1O60784 492 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 PALMO75781 387 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 SERPING1P05155 500 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 SHMT1P34896 483 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 RNASE9P60153 205 aaKnown RBP13.01□□□□□ -0.33
C11orf54-215ENST00000617482 ITIH3Q06033 890 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 CCDC65Q8IXS2 484 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 SCFD1Q8WVM8 642 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 EDEM3Q9BZQ6 932 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 EMILIN3Q9NT22 766 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 STIM2Q9P246 746 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 ADAMTS1Q9UHI8 967 aa13.01□□□□□ -0.33
C11orf54-215ENST00000617482 PACSIN2Q9UNF0 486 aaPredicted RBP13.01□□□□□ -0.33
C11orf54-215ENST00000617482 PLIN4Q96Q06 1357 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 KRT18P05783 430 aaKnown RBP13□□□□□ -0.33
C11orf54-215ENST00000617482 GYS1P13807 737 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 ADAM9Q13443 819 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 RAPGEF1Q13905 1077 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 CERS5Q8N5B7 392 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 FAM133AQ8N9E0 248 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 FAM76AQ8TAV0 307 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
C11orf54-215ENST00000617482 PCDHA2Q9Y5H9 948 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 A0A087X0T9 212 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 FAM228BP0C875 321 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 KLRC1P26715 233 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 EPS15P42566 896 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 SEPT2Q15019 361 aa13□□□□□ -0.33
C11orf54-215ENST00000617482 CFAP221Q4G0U5 840 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms