RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 TAOK3Q9H2K8 898 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 DNM3Q9UQ16 869 aa31.14■■■□□ 2.58
CSPG5-205ENST00000610462 EPN1Q9Y6I3 576 aaPredicted RBP31.14■■■□□ 2.58
CSPG5-205ENST00000610462 ELF2Q15723 593 aa31.13■■■□□ 2.57
CSPG5-205ENST00000610462 MEA1Q16626 185 aa31.13■■■□□ 2.57
CSPG5-205ENST00000610462 KIF4BQ2VIQ3 1234 aa31.13■■■□□ 2.57
CSPG5-205ENST00000610462 WDR59Q6PJI9 974 aa31.13■■■□□ 2.57
CSPG5-205ENST00000610462 PCMTD1Q96MG8 357 aaPredicted RBP31.13■■■□□ 2.57
CSPG5-205ENST00000610462 GLIS2Q9BZE0 524 aaPredicted RBP31.13■■■□□ 2.57
CSPG5-205ENST00000610462 IRX2Q9BZI1 471 aaPredicted RBP31.13■■■□□ 2.57
CSPG5-205ENST00000610462 NDST4Q9H3R1 872 aa31.13■■■□□ 2.57
CSPG5-205ENST00000610462 A0A1W2PQJ5 194 aa31.13■■■□□ 2.57
CSPG5-205ENST00000610462 ZBED6P86452 979 aa31.13■■■□□ 2.57
CSPG5-205ENST00000610462 AGPAT5Q9NUQ2 364 aa31.13■■■□□ 2.57
CSPG5-205ENST00000610462 NDUFA10O95299 355 aa31.12■■■□□ 2.57
CSPG5-205ENST00000610462 KRT18P05783 430 aaKnown RBP31.12■■■□□ 2.57
CSPG5-205ENST00000610462 ARHGAP29Q52LW3 1261 aa31.12■■■□□ 2.57
CSPG5-205ENST00000610462 HERC4Q5GLZ8 1057 aaPredicted RBP31.12■■■□□ 2.57
CSPG5-205ENST00000610462 SYT2Q8N9I0 419 aaPredicted RBP31.12■■■□□ 2.57
CSPG5-205ENST00000610462 SLF1Q9BQI6 1058 aa31.12■■■□□ 2.57
CSPG5-205ENST00000610462 PSMC6P62333 389 aa31.12■■■□□ 2.57
CSPG5-205ENST00000610462 TNIP1Q15025 636 aa31.12■■■□□ 2.57
CSPG5-205ENST00000610462 ARID3AQ99856 593 aa31.12■■■□□ 2.57
CSPG5-205ENST00000610462 POLR3CQ9BUI4 534 aaPredicted RBP31.12■■■□□ 2.57
CSPG5-205ENST00000610462 CCDC94Q9BW85 323 aaPredicted RBP31.12■■■□□ 2.57
CSPG5-205ENST00000610462 FGFBP2Q9BYJ0 223 aa31.12■■■□□ 2.57
CSPG5-205ENST00000610462 TBC1D7Q9P0N9 293 aa31.12■■■□□ 2.57
CSPG5-205ENST00000610462 SHTN1A0MZ66 631 aa31.11■■■□□ 2.57
CSPG5-205ENST00000610462 KIF20AO95235 890 aa31.11■■■□□ 2.57
CSPG5-205ENST00000610462 FKBP3Q00688 224 aaKnown RBP31.11■■■□□ 2.57
CSPG5-205ENST00000610462 CACNB1Q02641 598 aaPredicted RBP31.11■■■□□ 2.57
CSPG5-205ENST00000610462 EHMT1Q9H9B1 1298 aa31.11■■■□□ 2.57
CSPG5-205ENST00000610462 MRFAP1Q9Y605 127 aa31.11■■■□□ 2.57
CSPG5-205ENST00000610462 MNS1Q8NEH6 495 aa31.1■■■□□ 2.57
CSPG5-205ENST00000610462 GOLGB1Q14789 3259 aaKnown RBP31.1■■■□□ 2.57
CSPG5-205ENST00000610462 MEIS1O00470 390 aa31.1■■■□□ 2.57
CSPG5-205ENST00000610462 RASA3Q14644 834 aa31.1■■■□□ 2.57
CSPG5-205ENST00000610462 KCTD17Q8N5Z5 321 aa31.1■■■□□ 2.57
CSPG5-205ENST00000610462 WDR18Q9BV38 432 aa31.1■■■□□ 2.57
CSPG5-205ENST00000610462 CARD6Q9BX69 1037 aa31.1■■■□□ 2.57
CSPG5-205ENST00000610462 FBXO28Q9NVF7 368 aa31.1■■■□□ 2.57
CSPG5-205ENST00000610462 ZNHIT6Q9NWK9 470 aaKnown RBP31.1■■■□□ 2.57
CSPG5-205ENST00000610462 SIK3Q9Y2K2 1263 aa31.1■■■□□ 2.57
CSPG5-205ENST00000610462 PHF20L1A8MW92 1017 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 ZBTB7AO95365 584 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 ARHGAP25P42331 645 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 PABPC4Q13310 644 aaKnown RBP eCLIP31.09■■■□□ 2.57
CSPG5-205ENST00000610462 ERCC6LQ2NKX8 1250 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 LDHDQ86WU2 507 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 ZNF397Q8NF99 534 aaPredicted RBP31.09■■■□□ 2.57
CSPG5-205ENST00000610462 EIF2AK1Q9BQI3 630 aaKnown RBP31.09■■■□□ 2.57
CSPG5-205ENST00000610462 ZNF280AP59817 542 aaPredicted RBP31.09■■■□□ 2.57
CSPG5-205ENST00000610462 RAD51AP2Q09MP3 1159 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 GIT2Q14161 759 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 CCDC84Q86UT8 332 aaPredicted RBP31.09■■■□□ 2.57
CSPG5-205ENST00000610462 CEP63Q96MT8 703 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 EMILIN3Q9NT22 766 aa31.09■■■□□ 2.57
CSPG5-205ENST00000610462 REXO2Q9Y3B8 237 aaKnown RBP31.09■■■□□ 2.57
CSPG5-205ENST00000610462 TRAF5O00463 557 aa31.08■■■□□ 2.57
CSPG5-205ENST00000610462 ZNF569Q5MCW4 686 aa31.08■■■□□ 2.57
CSPG5-205ENST00000610462 SCFD1Q8WVM8 642 aa31.08■■■□□ 2.57
CSPG5-205ENST00000610462 COL4A3BPQ9Y5P4 624 aa31.08■■■□□ 2.57
CSPG5-205ENST00000610462 EML1O00423 815 aa31.07■■■□□ 2.56
CSPG5-205ENST00000610462 PTGER2P43116 358 aa31.07■■■□□ 2.56
CSPG5-205ENST00000610462 ZNF341Q9BYN7 854 aa31.07■■■□□ 2.56
CSPG5-205ENST00000610462 MYO1AQ9UBC5 1043 aa31.07■■■□□ 2.56
CSPG5-205ENST00000610462 SAMD1Q6SPF0 538 aaPredicted RBP31.07■■■□□ 2.56
CSPG5-205ENST00000610462 SLC5A5Q92911 643 aa31.07■■■□□ 2.56
CSPG5-205ENST00000610462 FEZ1Q99689 392 aa31.07■■■□□ 2.56
CSPG5-205ENST00000610462 KCTD10Q9H3F6 313 aa31.07■■■□□ 2.56
CSPG5-205ENST00000610462 RBBP6Q7Z6E9 1792 aaKnown RBP31.06■■■□□ 2.56
CSPG5-205ENST00000610462 TADA3O75528 432 aa31.06■■■□□ 2.56
CSPG5-205ENST00000610462 RPS12P25398 132 aaKnown RBP31.06■■■□□ 2.56
CSPG5-205ENST00000610462 TNFAIP1Q13829 316 aa31.06■■■□□ 2.56
CSPG5-205ENST00000610462 OTOP1Q7RTM1 612 aa31.06■■■□□ 2.56
CSPG5-205ENST00000610462 NELFCDQ8IXH7 590 aa31.06■■■□□ 2.56
CSPG5-205ENST00000610462 TEPSINQ96N21 525 aa31.06■■■□□ 2.56
CSPG5-205ENST00000610462 DEFB129Q9H1M3 183 aa31.06■■■□□ 2.56
CSPG5-205ENST00000610462 EFCAB8A8MWE9 144 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 NFKBIEO00221 500 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 PSMD10O75832 226 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 CDK17Q00537 523 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 CYP4A11Q02928 519 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 ZHX3Q9H4I2 956 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 EYA4O95677 639 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 GNA14O95837 355 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 POLD1P28340 1107 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 INPP5BP32019 993 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 LRCH2Q5VUJ6 765 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 REEP2Q9BRK0 252 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 TUFT1Q9NNX1 390 aa31.05■■■□□ 2.56
CSPG5-205ENST00000610462 SCAF8Q9UPN6 1271 aaKnown RBP31.05■■■□□ 2.56
CSPG5-205ENST00000610462 ABL1P00519 1130 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 CYLC1P35663 651 aaPredicted RBP31.04■■■□□ 2.56
CSPG5-205ENST00000610462 PPP2R5CQ13362 524 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 CCDC40Q4G0X9 1142 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 PPP4R3CPQ6ZMV5 832 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 ZC3H3Q8IXZ2 948 aaKnown RBP31.04■■■□□ 2.56
CSPG5-205ENST00000610462 CCDC170Q8IYT3 715 aa31.04■■■□□ 2.56
CSPG5-205ENST00000610462 UBXN4Q92575 508 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms