RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
FARP1-240ENST00000602263 H3BRB1 525 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 SGSM2O43147 1006 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 FIBPO43427 364 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 LGALS2P05162 132 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 SMIM10L2AP0DMW4 78 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 SMIM10L2BP0DMW5 78 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 GNAT1P11488 350 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 ICAM3P32942 547 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 KRT40Q6A162 431 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 FAM117BQ6P1L5 589 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 TRAF7Q6Q0C0 670 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 METTL7BQ6UX53 244 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 GDPD5Q8WTR4 605 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 GPKOWQ92917 476 aaPredicted RBP eCLIP12.07□□□□□ -0.48
FARP1-240ENST00000602263 WNT8BQ93098 351 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 HLA-CQ95604 372 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 SPZ1Q9BXG8 430 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 TUT1Q9H6E5 874 aaKnown RBP12.07□□□□□ -0.48
FARP1-240ENST00000602263 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
FARP1-240ENST00000602263 RALGAPA2Q2PPJ7 1873 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 LINC01553A4QN01 128 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 SPATA31C2B4DYI2 1134 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 CAND2O75155 1236 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 BMP1P13497 986 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 GNAQP50148 359 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 KCNQ1P51787 676 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 MBTPS1Q14703 1052 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 TCTN1Q2MV58 587 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 XRRA1Q6P2D8 792 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 NFXL1Q6ZNB6 911 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 CYFIP1Q7L576 1253 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 MB21D2Q8IYB1 491 aaPredicted RBP12.06□□□□□ -0.48
FARP1-240ENST00000602263 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 MYOCDQ8IZQ8 938 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 DBF4BQ8NFT6 615 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 IGDCC4Q8TDY8 1250 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 SEPT8Q92599 483 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 NECAB3Q96P71 396 aaPredicted RBP12.06□□□□□ -0.48
FARP1-240ENST00000602263 INPP4AQ96PE3 977 aaPredicted RBP12.06□□□□□ -0.48
FARP1-240ENST00000602263 MAP3K14Q99558 947 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 LZTS2Q9BRK4 669 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 LMCD1Q9NZU5 365 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 INSL6Q9Y581 213 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
FARP1-240ENST00000602263 TAF6LQ9Y6J9 622 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 MYO7AQ13402 2215 aa12.06□□□□□ -0.48
FARP1-240ENST00000602263 CCDC69A6NI79 296 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 TREHO43280 583 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 LPXNO60711 386 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 COL9A1P20849 921 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 SMARCA1P28370 1054 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 HOXC8P31273 242 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 ANTXR2P58335 489 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 ERVK-21P61565 698 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 MRPS9P82933 396 aaKnown RBP12.05□□□□□ -0.48
FARP1-240ENST00000602263 HIC1Q14526 733 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 UTP14CQ5TAP6 766 aaKnown RBP12.05□□□□□ -0.48
FARP1-240ENST00000602263 PCNX4Q63HM2 1172 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 SPRED2Q7Z698 418 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 NLRX1Q86UT6 975 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 TMTC2Q8N394 836 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 GIMAP8Q8ND71 665 aaPredicted RBP12.05□□□□□ -0.48
FARP1-240ENST00000602263 MAP4K1Q92918 833 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 GPR20Q99678 358 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 MTA3Q9BTC8 594 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 LY9Q9HBG7 655 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
FARP1-240ENST00000602263 PIK3CDO00329 1044 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 PRC1O43663 620 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 CTSHP09668 335 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 CALM1P0DP23 149 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 CALM2P0DP24 149 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 CALM3P0DP25 149 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 MCM5P33992 734 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 SP4Q02446 784 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 SEMA3FQ13275 785 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 PLEKHG4Q58EX7 1191 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
FARP1-240ENST00000602263 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 CDHR1Q96JP9 859 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 TMEM87BQ96K49 555 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 YME1L1Q96TA2 773 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 SENP7Q9BQF6 1050 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 MYL10Q9BUA6 226 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 RNPEPQ9H4A4 650 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 SUGCTQ9HAC7 445 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 SETD4Q9NVD3 440 aa12.04□□□□□ -0.48
FARP1-240ENST00000602263 LOXHD1Q8IVV2 1947 aa12.03□□□□□ -0.48
FARP1-240ENST00000602263 SH2B2O14492 632 aaPredicted RBP12.03□□□□□ -0.48
FARP1-240ENST00000602263 ARHGAP4P98171 946 aa12.03□□□□□ -0.48
FARP1-240ENST00000602263 TRIM50Q86XT4 487 aa12.03□□□□□ -0.48
FARP1-240ENST00000602263 APBB2Q92870 758 aa12.03□□□□□ -0.48
FARP1-240ENST00000602263 GPRASP2Q96D09 838 aa12.03□□□□□ -0.48
FARP1-240ENST00000602263 SAMD11Q96NU1 681 aa12.03□□□□□ -0.48
FARP1-240ENST00000602263 C1QTNF1Q9BXJ1 281 aa12.03□□□□□ -0.48
FARP1-240ENST00000602263 BCAS3Q9H6U6 928 aa12.03□□□□□ -0.48
FARP1-240ENST00000602263 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms