RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SIT1Q9Y3P8 196 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 MAP3K1Q13233 1512 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 ARHGEF12Q9NZN5 1544 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 PTPRMP28827 1452 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 PLEKHH2Q8IVE3 1493 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 C9orf84Q5VXU9 1444 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 KIAA1107Q9UPP5 1409 aa5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 RIMS1Q86UR5 1692 aaKnown RBP5.31□□□□□ -1.56
CKS1BP3-201ENST00000600888 ABCA6Q8N139 1617 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 TIAM1Q13009 1591 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 AGLP35573 1532 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 AQP7O14520 342 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 SGSM2O43147 1006 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 ZBTB7AO95365 584 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 MED14OSP0DP75 135 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 GLDCP23378 1020 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 SLC9A5Q14940 896 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 KIZQ2M2Z5 673 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 LDHDQ86WU2 507 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 DCP2Q8IU60 420 aaKnown RBP5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 TSPAN17Q96FV3 270 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 JAM3Q9BX67 310 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 COA3Q9Y2R0 106 aaPredicted RBP5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 VPS8Q8N3P4 1428 aa5.3□□□□□ -1.56
CKS1BP3-201ENST00000600888 MTUS2Q5JR59 1369 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 IRS2Q9Y4H2 1338 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 ADGBQ8N7X0 1667 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 NFIBO00712 420 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 DGKIO75912 1065 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 C8AP07357 584 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 C1QTNF9P0C862 333 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 SLC6A11P48066 632 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 CDR1P51861 262 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 ZNF200P98182 395 aaPredicted RBP5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 ZNF124Q15973 351 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 ATG14Q6ZNE5 492 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 NOP9Q86U38 636 aaKnown RBP5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 MZB1Q8WU39 189 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 SEC14L1Q92503 715 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 AP5M1Q9H0R1 490 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 EPB41L1Q9H4G0 881 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 TMEM260Q9NX78 707 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 TRAPPC8Q9Y2L5 1435 aa5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 INO80Q9ULG1 1556 aaPredicted RBP5.29□□□□□ -1.56
CKS1BP3-201ENST00000600888 SYCP2Q9BX26 1530 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 MROH2AA6NES4 1674 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 ESYT3A0FGR9 886 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 HGSO14964 777 aaPredicted RBP5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 N4BP3O15049 544 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 EFCAB14O75071 495 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 TSPAN15O95858 294 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 SOD2P04179 222 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 GRK2P25098 689 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 GRK3P35626 688 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 EPHB3P54753 998 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 NCKAP1LP55160 1127 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 GUCY1A3Q02108 690 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 PKN1Q16512 942 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 TRIM61Q5EBN2 209 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 AFAP1Q8N556 730 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 GSTCDQ8NEC7 633 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 SLC7A14Q8TBB6 771 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 ALG1Q9BT22 464 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 MRPL4Q9BYD3 311 aaKnown RBP5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 BCAS3Q9H6U6 928 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 SLC52A2Q9HAB3 445 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 NCOA5Q9HCD5 579 aaKnown RBP5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 NDOR1Q9UHB4 597 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 PALD1Q9ULE6 856 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 PLA2G2DQ9UNK4 145 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 SMG5Q9UPR3 1016 aaKnown RBP5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 PCDHA8Q9Y5H6 950 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 PCDHA5Q9Y5H7 936 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 CCNB3Q8WWL7 1395 aa5.28□□□□□ -1.56
CKS1BP3-201ENST00000600888 ARID4BQ4LE39 1312 aaPredicted RBP5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 LOC105371045A0A1W2PR82 267 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 FAM47E-STBD1D6RA91 191 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 PLD2O14939 933 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 KCNQ2O43526 872 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 PLXNC1O60486 1568 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 IGSF3O75054 1194 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 TADA3O75528 432 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 CRTAMO95727 393 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 NAT1P18440 290 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 FBLN1P23142 703 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 PAK1Q13153 545 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 TARBP2Q15633 366 aaKnown RBP5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 CHRNA2Q15822 529 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 STEAP3Q658P3 488 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 MILR1Q7Z6M3 343 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 MTDHQ86UE4 582 aaKnown RBP5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 JAZF1Q86VZ6 243 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 IGDCC3Q8IVU1 814 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 PCDH19Q8TAB3 1148 aa5.27□□□□□ -1.57
CKS1BP3-201ENST00000600888 ALG3Q92685 438 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms