RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 STRNO43815 780 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 PPP6R2O75170 966 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ATP5HO75947 161 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 CAMTA2O94983 1202 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ATP6V1G2O95670 118 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 FGRP09769 529 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SERPINB8P50452 374 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 NSUN2Q08J23 767 aaKnown RBP eCLIP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 NECTIN1Q15223 517 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 E2F5Q15329 346 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 CCDC178Q5BJE1 867 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 IFFO2Q5TF58 517 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SUSD4Q5VX71 490 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 MSL1Q68DK7 614 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 CWC27Q6UX04 472 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 PACS1Q6VY07 963 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 C11orf74Q86VG3 221 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 LRRN4CLQ8ND94 238 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 B4GALNT2Q8NHY0 566 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 DHX38Q92620 1227 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 BHMTQ93088 406 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 PNKPQ96T60 521 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 PYM1Q9BRP8 204 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 KIF9Q9HAQ2 790 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 PLEKHA5Q9HAU0 1116 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 CTTNBP2NLQ9P2B4 639 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 BARX2Q9UMQ3 279 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ZBTB12Q9Y330 459 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ADGRG1Q9Y653 693 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 LAMB4A4D0S4 1761 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 COL5A3P25940 1745 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 TAF1P21675 1872 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ATP8B3O60423 1300 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 ASAP2O43150 1006 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 RPS6KB1P23443 525 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 LSP1P33241 339 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 RPL26P61254 145 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 MTMR3Q13615 1198 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 BYSLQ13895 437 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SPECC1Q5M775 1068 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 NT5DC1Q5TFE4 455 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 CEP68Q76N32 757 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 KRT27Q7Z3Y8 459 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 RIC3Q7Z5B4 369 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 DEFB132Q7Z7B7 95 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 KIAA0907Q7Z7F0 614 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 NLRP14Q86W24 1093 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 IFNL3Q8IZI9 196 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 WDR66Q8TBY9 1149 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 THOC1Q96FV9 657 aaKnown RBP4.81□□□□□ -1.64
LRIT3-202ENST00000594814 CEP95Q96GE4 821 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 IL1RAPL2Q9NP60 686 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 SLC39A2Q9NP94 309 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 TBCCD1Q9NVR7 557 aa4.81□□□□□ -1.64
LRIT3-202ENST00000594814 UTYO14607 1347 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 WDR19Q8NEZ3 1342 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 F8VZ95 297 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CES2O00748 559 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 HNRNPCL1O60812 293 aaKnown RBP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CAND2O75155 1236 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 SERPINC1P01008 464 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 XRCC5P13010 732 aaKnown RBP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CALB2P22676 271 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 MDH1P40925 334 aaKnown RBP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 NONOQ15233 471 aaKnown RBP eCLIP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CAMK4Q16566 473 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 RRP12Q5JTH9 1297 aaKnown RBP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 HYIQ5T013 277 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 NCAPH2Q6IBW4 605 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CCDC129Q6ZRS4 1044 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 SMYD1Q8NB12 490 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 SMC1BQ8NDV3 1235 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 SPDYE1Q8NFV5 336 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 RSAD2Q8WXG1 361 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 NCSTNQ92542 709 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 SH3KBP1Q96B97 665 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 L3MBTL3Q96JM7 780 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 MTRQ99707 1265 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 SELENOOQ9BVL4 669 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 NSRP1Q9H0G5 558 aaKnown RBP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 TMEM98Q9Y2Y6 226 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 TMED5Q9Y3A6 229 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CARMIL3Q8ND23 1372 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 H3BQV1 296 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 TMCC1O94876 653 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 HNRNPCP07910 306 aaKnown RBP eCLIP4.8□□□□□ -1.64
LRIT3-202ENST00000594814 KRT9P35527 623 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 SESN3P58005 492 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CDK17Q00537 523 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 GSTA3Q16772 222 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 WDR45BQ5MNZ6 344 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 USPL1Q5W0Q7 1092 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 TBC1D9BQ66K14 1250 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 BLOC1S2Q6QNY1 142 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 SEPT14Q6ZU15 432 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 UNC13DQ70J99 1090 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CEP57Q86XR8 500 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 CACNA2D3Q8IZS8 1091 aa4.8□□□□□ -1.64
LRIT3-202ENST00000594814 TC2NQ8N9U0 490 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms