RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 RNF219Q5W0B1 726 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 DCP1BQ8IZD4 617 aaKnown RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 ZNF557Q8N988 423 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 APPL2Q8NEU8 664 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 STAMQ92783 540 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 DHX58Q96C10 678 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 CCDC114Q96M63 670 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 MTRQ99707 1265 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 STRIP2Q9ULQ0 834 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 EIF3DO15371 548 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 EGFRP00533 1210 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 KIF23Q02241 960 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 PAK2Q13177 524 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 PPP4R3CPQ6ZMV5 832 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 FERMT3Q86UX7 667 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 GPBP1Q86WP2 473 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 TMX3Q96JJ7 454 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 FTHL17Q9BXU8 183 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 EMILIN2Q9BXX0 1053 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 RTFDC1Q9BY42 306 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 LSM7Q9UK45 103 aaKnown RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 IPPQ9Y573 584 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 STK36Q9NRP7 1315 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 COL1A1P02452 1464 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 K7ERI5 159 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 AKR1B10O60218 316 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 CYBBP04839 570 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 RECQLP46063 649 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 RAB30Q15771 203 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 MLKLQ8NB16 471 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 TMEM169Q96HH4 297 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 PIH1D3Q9NQM4 214 aaKnown RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 RAB23Q9ULC3 237 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 PCDHB8Q9UN66 801 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 KIF5CO60282 957 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 CD4P01730 458 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 STAT5BP51692 787 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 DDR1Q08345 913 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 MAPRE1Q15691 268 aaKnown RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 NOSTRINQ8IVI9 506 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 SH3TC2Q8TF17 1288 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 RNF139Q8WU17 664 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 CPSF3Q9UKF6 684 aaKnown RBP6.91□□□□□ -1.3
SMAD4-212ENST00000591126 PCDHA6Q9UN73 950 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 PCDHB15Q9Y5E8 787 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 PCDHA8Q9Y5H6 950 aa6.91□□□□□ -1.3
SMAD4-212ENST00000591126 RPS6KA5O75582 802 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 ICAM1P05362 532 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 PPARGP37231 505 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 ALDH1A3P47895 512 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MRE11P49959 708 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 PTGDRQ13258 359 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 TMEM132BQ14DG7 1078 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 FAM110CQ1W6H9 321 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 CRY2Q49AN0 593 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 CEP135Q66GS9 1140 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 TRMT2AQ8IZ69 625 aaKnown RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 RABGGTAQ92696 567 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 GMCL1Q96IK5 515 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MXD3Q9BW11 206 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MRPL4Q9BYD3 311 aaKnown RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 TSGA10Q9BZW7 698 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 JPH1Q9HDC5 661 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 RIC8AQ9NPQ8 531 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MTMR4Q9NYA4 1195 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MTUS1Q9ULD2 1270 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 ATP11BQ9Y2G3 1177 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 HNRNPDLO14979 420 aaKnown RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MYZAPP0CAP1 466 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 KRT5P13647 590 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 CA4P22748 312 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 HADHQ16836 314 aaKnown RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MUM1L1Q5H9M0 696 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 RSRC2Q7L4I2 434 aaKnown RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MYOCDQ8IZQ8 938 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 ANKRD13CQ8N6S4 541 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 USP38Q8NB14 1042 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 MAP4K1Q92918 833 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 IKBKGQ9Y6K9 419 aa6.9□□□□□ -1.3
SMAD4-212ENST00000591126 FAM208AQ9UK61 1670 aaKnown RBP6.9□□□□□ -1.3
SMAD4-212ENST00000591126 HMGB1P1B2RPK0 211 aaPredicted RBP6.9□□□□□ -1.31
SMAD4-212ENST00000591126 HUS1O60921 280 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 MYCP01106 439 aaPredicted RBP6.9□□□□□ -1.31
SMAD4-212ENST00000591126 CD19P15391 556 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 GRK4P32298 578 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 KRT9P35527 623 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 QARSP47897 775 aaKnown RBP6.9□□□□□ -1.31
SMAD4-212ENST00000591126 AK2P54819 239 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 HERVK_113P62684 666 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 RAD51Q06609 339 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 IKBKEQ14164 716 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 STILQ15468 1287 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 DCAF4L1Q3SXM0 396 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 DACT2Q5SW24 774 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 BTBD8Q5XKL5 378 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 GPATCH11Q8N954 259 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 STKLD1Q8NE28 680 aa6.9□□□□□ -1.31
SMAD4-212ENST00000591126 PIGSQ96S52 555 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms