RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 H3BRB1 525 aa26.72■■□□□ 1.87
LSM7-204ENST00000587502 STXBP3O00186 592 aa26.72■■□□□ 1.87
LSM7-204ENST00000587502 RBL2Q08999 1139 aa26.72■■□□□ 1.87
LSM7-204ENST00000587502 PTK7Q13308 1070 aa26.72■■□□□ 1.87
LSM7-204ENST00000587502 GUCD1Q96NT3 240 aa26.72■■□□□ 1.87
LSM7-204ENST00000587502 GPR20Q99678 358 aa26.72■■□□□ 1.87
LSM7-204ENST00000587502 TUT1Q9H6E5 874 aaKnown RBP26.72■■□□□ 1.87
LSM7-204ENST00000587502 UBIAD1Q9Y5Z9 338 aa26.72■■□□□ 1.87
LSM7-204ENST00000587502 SMCO2A6NFE2 343 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 LGALS2P05162 132 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 MTMR1Q13613 665 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 RAB30Q15771 203 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 PFKFB3Q16875 520 aaPredicted RBP26.71■■□□□ 1.87
LSM7-204ENST00000587502 RUFY3Q7L099 469 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 DEFB128Q7Z7B8 93 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 CCDC12Q8WUD4 166 aaPredicted RBP26.71■■□□□ 1.87
LSM7-204ENST00000587502 TIFAQ96CG3 184 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 CTAGE1Q96RT6 745 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 JADE2Q9NQC1 790 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 CXXC1Q9P0U4 656 aaPredicted RBP26.71■■□□□ 1.87
LSM7-204ENST00000587502 MSRAQ9UJ68 235 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 ZNF215Q9UL58 517 aaPredicted RBP26.71■■□□□ 1.87
LSM7-204ENST00000587502 SLC4A7Q9Y6M7 1214 aa26.71■■□□□ 1.87
LSM7-204ENST00000587502 SELPP16109 830 aa26.7■■□□□ 1.86
LSM7-204ENST00000587502 ITGB5P18084 799 aa26.7■■□□□ 1.86
LSM7-204ENST00000587502 AKAP17AQ02040 695 aaKnown RBP26.7■■□□□ 1.86
LSM7-204ENST00000587502 AP3B2Q13367 1082 aa26.7■■□□□ 1.86
LSM7-204ENST00000587502 TYW1BQ6NUM6 668 aa26.7■■□□□ 1.86
LSM7-204ENST00000587502 TM6SF1Q9BZW5 370 aa26.7■■□□□ 1.86
LSM7-204ENST00000587502 TTYH1Q9H313 450 aaPredicted RBP26.7■■□□□ 1.86
LSM7-204ENST00000587502 BCAS3Q9H6U6 928 aa26.7■■□□□ 1.86
LSM7-204ENST00000587502 ZSWIM6Q9HCJ5 1215 aa26.7■■□□□ 1.86
LSM7-204ENST00000587502 CYP46A1Q9Y6A2 500 aa26.7■■□□□ 1.86
LSM7-204ENST00000587502 SCG2P13521 617 aa26.69■■□□□ 1.86
LSM7-204ENST00000587502 EVCP57679 992 aa26.69■■□□□ 1.86
LSM7-204ENST00000587502 MCTP2Q6DN12 878 aa26.69■■□□□ 1.86
LSM7-204ENST00000587502 VWCEQ96DN2 955 aa26.69■■□□□ 1.86
LSM7-204ENST00000587502 PBX4Q9BYU1 374 aa26.69■■□□□ 1.86
LSM7-204ENST00000587502 FTOQ9C0B1 505 aaKnown RBP eCLIP26.69■■□□□ 1.86
LSM7-204ENST00000587502 C17orf102A2RUQ5 167 aa26.68■■□□□ 1.86
LSM7-204ENST00000587502 ZBBXA8MT70 800 aa26.68■■□□□ 1.86
LSM7-204ENST00000587502 PRPF3O43395 683 aaKnown RBP26.68■■□□□ 1.86
LSM7-204ENST00000587502 GNAT1P11488 350 aa26.68■■□□□ 1.86
LSM7-204ENST00000587502 KCNA2P16389 499 aa26.68■■□□□ 1.86
LSM7-204ENST00000587502 LRRC8DQ7L1W4 858 aa26.68■■□□□ 1.86
LSM7-204ENST00000587502 CDX2Q99626 313 aaPredicted RBP26.68■■□□□ 1.86
LSM7-204ENST00000587502 CKBP12277 381 aa26.67■■□□□ 1.86
LSM7-204ENST00000587502 DHX38Q92620 1227 aaKnown RBP26.67■■□□□ 1.86
LSM7-204ENST00000587502 MXRA8Q9BRK3 442 aa26.67■■□□□ 1.86
LSM7-204ENST00000587502 ANO3Q9BYT9 981 aa26.67■■□□□ 1.86
LSM7-204ENST00000587502 ZNF576Q9H609 170 aa26.67■■□□□ 1.86
LSM7-204ENST00000587502 TRIP12Q14669 1992 aaPredicted RBP26.67■■□□□ 1.86
LSM7-204ENST00000587502 TANC1Q9C0D5 1861 aa26.66■■□□□ 1.86
LSM7-204ENST00000587502 ESYT2A0FGR8 921 aa26.66■■□□□ 1.86
LSM7-204ENST00000587502 GRXCR1A8MXD5 290 aa26.66■■□□□ 1.86
LSM7-204ENST00000587502 EIF5BO60841 1220 aaKnown RBP26.66■■□□□ 1.86
LSM7-204ENST00000587502 ATP9AO75110 1047 aa26.66■■□□□ 1.86
LSM7-204ENST00000587502 BAIAP3O94812 1187 aa26.66■■□□□ 1.86
LSM7-204ENST00000587502 SEPT1Q8WYJ6 367 aa26.66■■□□□ 1.86
LSM7-204ENST00000587502 ATP6V0A1Q93050 837 aa26.66■■□□□ 1.86
LSM7-204ENST00000587502 C6orf50Q9HD87 102 aa26.66■■□□□ 1.86
LSM7-204ENST00000587502 SMIM10L2AP0DMW4 78 aa26.65■■□□□ 1.86
LSM7-204ENST00000587502 SMIM10L2BP0DMW5 78 aa26.65■■□□□ 1.86
LSM7-204ENST00000587502 GNA11P29992 359 aa26.65■■□□□ 1.86
LSM7-204ENST00000587502 PDIA3P30101 505 aaKnown RBP26.65■■□□□ 1.86
LSM7-204ENST00000587502 HOXC8P31273 242 aa26.65■■□□□ 1.86
LSM7-204ENST00000587502 CLK2P49760 499 aaKnown RBP26.65■■□□□ 1.86
LSM7-204ENST00000587502 SP4Q02446 784 aa26.65■■□□□ 1.86
LSM7-204ENST00000587502 SERINC5Q86VE9 423 aa26.65■■□□□ 1.86
LSM7-204ENST00000587502 PHOSPHO2Q8TCD6 241 aa26.65■■□□□ 1.86
LSM7-204ENST00000587502 RNF26Q9BY78 433 aaPredicted RBP26.65■■□□□ 1.86
LSM7-204ENST00000587502 ZMYND12Q9H0C1 365 aa26.65■■□□□ 1.86
LSM7-204ENST00000587502 ATP2A2P16615 1042 aaKnown RBP26.64■■□□□ 1.86
LSM7-204ENST00000587502 IFNAR1P17181 557 aa26.64■■□□□ 1.86
LSM7-204ENST00000587502 SREBF1P36956 1147 aa26.64■■□□□ 1.86
LSM7-204ENST00000587502 PBX2P40425 430 aa26.64■■□□□ 1.86
LSM7-204ENST00000587502 CEP55Q53EZ4 464 aa26.64■■□□□ 1.86
LSM7-204ENST00000587502 UTP14CQ5TAP6 766 aaKnown RBP26.64■■□□□ 1.86
LSM7-204ENST00000587502 SLC9A7Q96T83 725 aa26.64■■□□□ 1.86
LSM7-204ENST00000587502 SCN5AQ14524 2016 aa26.64■■□□□ 1.86
LSM7-204ENST00000587502 TCF7P36402 384 aaPredicted RBP26.63■■□□□ 1.85
LSM7-204ENST00000587502 ZNF200P98182 395 aaPredicted RBP26.63■■□□□ 1.85
LSM7-204ENST00000587502 NTRK3Q16288 839 aa26.63■■□□□ 1.85
LSM7-204ENST00000587502 TRIM71Q2Q1W2 868 aaKnown RBP26.63■■□□□ 1.85
LSM7-204ENST00000587502 BICD2Q8TD16 824 aa26.63■■□□□ 1.85
LSM7-204ENST00000587502 ZNF274Q96GC6 653 aaPredicted RBP26.63■■□□□ 1.85
LSM7-204ENST00000587502 RNPEPQ9H4A4 650 aa26.63■■□□□ 1.85
LSM7-204ENST00000587502 KCNH7Q9NS40 1196 aa26.63■■□□□ 1.85
LSM7-204ENST00000587502 PCDHA11Q9Y5I1 949 aa26.63■■□□□ 1.85
LSM7-204ENST00000587502 DOCK5Q9H7D0 1870 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 CAND2O75155 1236 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 CXCL10P02778 98 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 ZNF76P36508 570 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 TOB2Q14106 344 aaPredicted RBP26.62■■□□□ 1.85
LSM7-204ENST00000587502 PKN1Q16512 942 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 NIPA1Q7RTP0 329 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 CCDC148Q8NFR7 591 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 PHKBQ93100 1093 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 SDF4Q9BRK5 362 aa26.62■■□□□ 1.85
LSM7-204ENST00000587502 JPH1Q9HDC5 661 aaPredicted RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms