RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 LINC01599Q8WXQ3 324 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 GTF3C6Q969F1 213 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 EPN3Q9H201 632 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 BATF3Q9NR55 127 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 ST7Q9NRC1 585 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 CWC25Q9NXE8 425 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-203ENST00000585448 ABCF2Q9UG63 623 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 BLOC1S6Q9UL45 172 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 TCFL5Q9UL49 500 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 PYCARDQ9ULZ3 195 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 MYO6Q9UM54 1294 aa6.96□□□□□ -1.3
SMAD4-203ENST00000585448 SF3B6Q9Y3B4 125 aaKnown RBP6.96□□□□□ -1.3
SMAD4-203ENST00000585448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.96□□□□□ -1.3
SMAD4-203ENST00000585448 HFM1A2PYH4 1435 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 POLR3GO15318 223 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 RTN2O75298 545 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 TP53P04637 393 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 EPHX1P07099 455 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 ZGLP1P0C6A0 271 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 GPTP24298 496 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 OAS2P29728 719 aaKnown RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 RBL2Q08999 1139 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 DUSP4Q13115 394 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 GRB10Q13322 594 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 RAB33AQ14088 237 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 TPD52L1Q16890 204 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 HSP90AB2PQ58FF8 381 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 HHATQ5VTY9 493 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 KLHL10Q6JEL2 608 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 ZNF280DQ6N043 979 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 KIAA1211LQ6NV74 962 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 FAM178BQ8IXR5 827 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 C17orf53Q8N3J3 647 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 ARHGEF39Q8N4T4 335 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 PDZD8Q8NEN9 1154 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 KCND1Q9NSA2 647 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 UTP6Q9NYH9 597 aaKnown RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 ZNF215Q9UL58 517 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-203ENST00000585448 PCDHB10Q9UN67 800 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 CECR2Q9BXF3 1484 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 CLASP1Q7Z460 1538 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 GPRASP1Q5JY77 1395 aa6.95□□□□□ -1.3
SMAD4-203ENST00000585448 FMN1Q68DA7 1419 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 LRRC9Q6ZRR7 1453 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 DNAJC25-GNG10A0A024R161 153 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 EPB41L2O43491 1005 aaKnown RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 PPFIA4O75335 1185 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 PPM1BO75688 479 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 HPXP02790 462 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 LMAN1P49257 510 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 ST5P78524 1137 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 CHRNEQ04844 493 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 SMC1AQ14683 1233 aaKnown RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 ELF2Q15723 593 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 DDR2Q16832 855 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 RALGPS1Q5JS13 557 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 NOL9Q5SY16 702 aaKnown RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 ANKRD45Q5TZF3 282 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 RCSD1Q6JBY9 416 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 C6orf15Q6UXA7 325 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 ANKS3Q6ZW76 656 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 REXO1L1PQ8IX06 675 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 FIBCD1Q8N539 461 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 CXorf38Q8TB03 319 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 SREK1Q8WXA9 508 aaKnown RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 RTF1Q92541 710 aaKnown RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 N4BP2L2Q92802 583 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 SYTL4Q96C24 671 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 CCDC34Q96HJ3 373 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 FCRL2Q96LA5 508 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-203ENST00000585448 PLEKHG4BQ96PX9 1271 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 DSCC1Q9BVC3 393 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 STK31Q9BXU1 1019 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 FOXP3Q9BZS1 431 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 RMI1Q9H9A7 625 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 PRDM7Q9NQW5 492 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 SLAMF8Q9P0V8 285 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 FRMD4BQ9Y2L6 1034 aa6.94□□□□□ -1.3
SMAD4-203ENST00000585448 TPD52L2O43399 206 aaKnown RBP6.93□□□□□ -1.3
SMAD4-203ENST00000585448 PAPLNO95428 1278 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 VAV1P15498 845 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 KIR2DL1P43626 348 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-203ENST00000585448 KIR2DL2P43627 348 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-203ENST00000585448 AFMP43652 599 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 PTPN14Q15678 1187 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 CCDC178Q5BJE1 867 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 WLSQ5T9L3 541 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 CCDC50Q8IVM0 306 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 CKAP2LQ8IYA6 745 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 LILRA2Q8N149 483 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 CRACR2BQ8N4Y2 399 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-203ENST00000585448 ANKS4BQ8N8V4 417 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 TDRD7Q8NHU6 1098 aaKnown RBP6.93□□□□□ -1.3
SMAD4-203ENST00000585448 SAAL1Q96ER3 474 aa6.93□□□□□ -1.3
SMAD4-203ENST00000585448 THOC1Q96FV9 657 aaKnown RBP6.93□□□□□ -1.3
SMAD4-203ENST00000585448 CABS1Q96KC9 395 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms