RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 SSRP1Q08945 709 aaKnown RBP19.01■□□□□ 0.63
SREBF1-219ENST00000580540 BFSP2Q13515 415 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 PSRC1Q6PGN9 363 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-219ENST00000580540 DEFB123Q8N688 67 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 GIMAP8Q8ND71 665 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-219ENST00000580540 ZNF274Q96GC6 653 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-219ENST00000580540 GPR20Q99678 358 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 RNF26Q9BY78 433 aaPredicted RBP19.01■□□□□ 0.63
SREBF1-219ENST00000580540 JADE2Q9NQC1 790 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 GTF2IRD1Q9UHL9 959 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 TELO2Q9Y4R8 837 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 LAMA3Q16787 3333 aa19.01■□□□□ 0.63
SREBF1-219ENST00000580540 H3BRB1 525 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 HAS3O00219 553 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 EIF5BO60841 1220 aaKnown RBP19■□□□□ 0.63
SREBF1-219ENST00000580540 FGBP02675 491 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 AP3B2Q13367 1082 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 DEFB128Q7Z7B8 93 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 SESTD1Q86VW0 696 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 TRIM22Q8IYM9 498 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 RPUSD2Q8IZ73 545 aaKnown RBP19■□□□□ 0.63
SREBF1-219ENST00000580540 MXRA8Q9BRK3 442 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 C16orf70Q9BSU1 422 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 TUT1Q9H6E5 874 aaKnown RBP19■□□□□ 0.63
SREBF1-219ENST00000580540 DOCK5Q9H7D0 1870 aa19■□□□□ 0.63
SREBF1-219ENST00000580540 SZT2Q5T011 3432 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 KCNA2P16389 499 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 ANAPC15P60006 121 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 ZNF200P98182 395 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-219ENST00000580540 GPR153Q6NV75 609 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 CPLX2Q6PUV4 134 aaKnown RBP18.99■□□□□ 0.63
SREBF1-219ENST00000580540 OTOP2Q7RTS6 562 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 TEX2Q8IWB9 1127 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 CCDC155Q8N6L0 562 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 CYP2W1Q8TAV3 490 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 ZMYND12Q9H0C1 365 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 VPS54Q9P1Q0 977 aa18.99■□□□□ 0.63
SREBF1-219ENST00000580540 ESYT2A0FGR8 921 aa18.98■□□□□ 0.63
SREBF1-219ENST00000580540 ADAMTS3O15072 1205 aa18.98■□□□□ 0.63
SREBF1-219ENST00000580540 SEC24BO95487 1268 aa18.98■□□□□ 0.63
SREBF1-219ENST00000580540 GNA11P29992 359 aa18.98■□□□□ 0.63
SREBF1-219ENST00000580540 CLK2P49760 499 aaKnown RBP18.98■□□□□ 0.63
SREBF1-219ENST00000580540 TRIM50Q86XT4 487 aa18.98■□□□□ 0.63
SREBF1-219ENST00000580540 REXO1Q8N1G1 1221 aaKnown RBP18.98■□□□□ 0.63
SREBF1-219ENST00000580540 CCDC148Q8NFR7 591 aa18.98■□□□□ 0.63
SREBF1-219ENST00000580540 FAM161BQ96MY7 647 aa18.98■□□□□ 0.63
SREBF1-219ENST00000580540 KCNH7Q9NS40 1196 aa18.98■□□□□ 0.63
SREBF1-219ENST00000580540 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-219ENST00000580540 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-219ENST00000580540 MAFGO15525 162 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 IQCF3P0C7M6 154 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 ARP10275 920 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 TCF7P36402 384 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-219ENST00000580540 SREBF1P36956 1147 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 NLRP5P59047 1200 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 SMAD3P84022 425 aaKnown RBP18.97■□□□□ 0.63
SREBF1-219ENST00000580540 ARHGAP4P98171 946 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 CEP55Q53EZ4 464 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 RASGRP4Q8TDF6 673 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 SEPT1Q8WYJ6 367 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 CTAGE1Q96RT6 745 aa18.97■□□□□ 0.63
SREBF1-219ENST00000580540 FTOQ9C0B1 505 aaKnown RBP eCLIP18.97■□□□□ 0.63
SREBF1-219ENST00000580540 SLKQ9H2G2 1235 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-219ENST00000580540 MTIF3Q9H2K0 278 aaKnown RBP18.97■□□□□ 0.63
SREBF1-219ENST00000580540 ZNF215Q9UL58 517 aaPredicted RBP18.97■□□□□ 0.63
SREBF1-219ENST00000580540 C17orf102A2RUQ5 167 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 ZBBXA8MT70 800 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 PITPNM1O00562 1244 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 SMIM10L2AP0DMW4 78 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 SMIM10L2BP0DMW5 78 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 ZNF697Q5TEC3 545 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 CAGE1Q8TC20 777 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 BICD2Q8TD16 824 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 HERVK_113Q902F9 699 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 DHX38Q92620 1227 aaKnown RBP18.96■□□□□ 0.63
SREBF1-219ENST00000580540 ATP6V0A1Q93050 837 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 UIMC1Q96RL1 719 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 SDF4Q9BRK5 362 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 CXXC1Q9P0U4 656 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-219ENST00000580540 TPCN1Q9ULQ1 816 aa18.96■□□□□ 0.63
SREBF1-219ENST00000580540 TRIP12Q14669 1992 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-219ENST00000580540 GSTTP1A0A1W2PQM5 241 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 GRXCR1A8MXD5 290 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 DEXIO95424 95 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 AK2P54819 239 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 PTK7Q13308 1070 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 HIC1Q14526 733 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 ANKRD1Q15327 319 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 MCTP2Q6DN12 878 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 FAM109BQ6ICB4 259 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-219ENST00000580540 PLA2G4DQ86XP0 818 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 GLG1Q92896 1179 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 RNPEPQ9H4A4 650 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 JPH1Q9HDC5 661 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-219ENST00000580540 SLC9A2Q9UBY0 812 aa18.95■□□□□ 0.62
SREBF1-219ENST00000580540 DDX39AO00148 427 aaKnown RBP18.94■□□□□ 0.62
SREBF1-219ENST00000580540 MEIS1O00470 390 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 DTNBO60941 627 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 SELPP16109 830 aa18.94■□□□□ 0.62
SREBF1-219ENST00000580540 MARK3P27448 753 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms