RNA–Protein interactions for RNA: ENST00000564139.5

E4F1-204, Transcript of E4F transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene E4F1, Length 2,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-204ENST00000564139 USP17L8P0C7I0 530 aa22.4■■□□□ 1.18
E4F1-204ENST00000564139 HOXA7P31268 230 aaPredicted RBP22.4■■□□□ 1.18
E4F1-204ENST00000564139 WLSQ5T9L3 541 aa22.4■■□□□ 1.18
E4F1-204ENST00000564139 RUFY4Q6ZNE9 571 aa22.4■■□□□ 1.18
E4F1-204ENST00000564139 PACSIN1Q9BY11 444 aa22.4■■□□□ 1.18
E4F1-204ENST00000564139 MTMR7Q9Y216 660 aa22.4■■□□□ 1.18
E4F1-204ENST00000564139 COL4A3BPQ9Y5P4 624 aa22.4■■□□□ 1.18
E4F1-204ENST00000564139 LAMB2P55268 1798 aa22.39■■□□□ 1.18
E4F1-204ENST00000564139 A0A087X0T9 212 aa22.39■■□□□ 1.18
E4F1-204ENST00000564139 PALM3A6NDB9 673 aaPredicted RBP22.39■■□□□ 1.18
E4F1-204ENST00000564139 FAM228BP0C875 321 aa22.39■■□□□ 1.18
E4F1-204ENST00000564139 CTNNA1P35221 906 aaKnown RBP22.39■■□□□ 1.18
E4F1-204ENST00000564139 LRRC41Q15345 812 aa22.39■■□□□ 1.18
E4F1-204ENST00000564139 RPS6KA1Q15418 735 aa22.39■■□□□ 1.18
E4F1-204ENST00000564139 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.39■■□□□ 1.18
E4F1-204ENST00000564139 OSBPL7Q9BZF2 842 aa22.39■■□□□ 1.18
E4F1-204ENST00000564139 KCNK3O14649 394 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 KIF1CO43896 1103 aaKnown RBP22.39■■□□□ 1.17
E4F1-204ENST00000564139 TXKP42681 527 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 PSEN1P49768 467 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 QPCTQ16769 361 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 SCFD2Q8WU76 684 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 CDK5RAP3Q96JB5 506 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 LZTS2Q9BRK4 669 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 C6orf50Q9HD87 102 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 NIP7Q9Y221 180 aaKnown RBP eCLIP22.39■■□□□ 1.17
E4F1-204ENST00000564139 CEP83Q9Y592 693 aa22.39■■□□□ 1.17
E4F1-204ENST00000564139 USP17L3A6NCW0 530 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 USP17L4A6NCW7 530 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 CAMTA2O94983 1202 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 NT5C2P49902 561 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 PSMD2Q13200 908 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 ORC2Q13416 577 aaPredicted RBP22.38■■□□□ 1.17
E4F1-204ENST00000564139 SNCBQ16143 134 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 ANKRD20A8PQ5CZ79 823 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 AGBL2Q5U5Z8 902 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 USP17L1Q7RTZ2 530 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 GLIS3Q8NEA6 775 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 SMCO2A6NFE2 343 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 C5orf60A6NFR6 353 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 BHMG1C9JSJ3 638 aaPredicted RBP22.38■■□□□ 1.17
E4F1-204ENST00000564139 PPP2R2AP63151 447 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 RAPGEF1Q13905 1077 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 CYB5D1Q6P9G0 228 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 FBXO33Q7Z6M2 555 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 PARP9Q8IXQ6 854 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 TBCKQ8TEA7 893 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 RAD54LQ92698 747 aa22.38■■□□□ 1.17
E4F1-204ENST00000564139 DNM1LO00429 736 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 PAEPP09466 180 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 GNA11P29992 359 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 FKBP3Q00688 224 aaKnown RBP22.37■■□□□ 1.17
E4F1-204ENST00000564139 SPRED3Q2MJR0 410 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 ZCWPW2Q504Y3 356 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 BRINP3Q76B58 766 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 FUKQ8N0W3 1084 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 SEC16BQ96JE7 1060 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 PBKQ96KB5 322 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 SUFUQ9UMX1 484 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 BTNL10A8MVZ5 291 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 KIF4AO95239 1232 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 TMOD1P28289 359 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 ELF1P32519 619 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 KLHL30Q0D2K2 578 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 C12orf60Q5U649 245 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 DDX42Q86XP3 938 aaKnown RBP eCLIP22.37■■□□□ 1.17
E4F1-204ENST00000564139 CCDC50Q8IVM0 306 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 MYOCDQ8IZQ8 938 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 DYNLL2Q96FJ2 89 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 ADAMTS1Q9UHI8 967 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 LEMD3Q9Y2U8 911 aa22.37■■□□□ 1.17
E4F1-204ENST00000564139 GOLGA8HP0CJ92 632 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 USP11P51784 963 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 ARID5AQ03989 594 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 MTMR3Q13615 1198 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 INTS5Q6P9B9 1019 aaKnown RBP22.36■■□□□ 1.17
E4F1-204ENST00000564139 ACTRT1Q8TDG2 376 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 DDX12PQ92771 950 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 MTMR9Q96QG7 549 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 NEUROG2Q9H2A3 272 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 BSDC1Q9NW68 430 aaPredicted RBP22.36■■□□□ 1.17
E4F1-204ENST00000564139 BCCIPQ9P287 314 aaKnown RBP eCLIP22.36■■□□□ 1.17
E4F1-204ENST00000564139 STRCP1A6NGW2 1772 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 TRAF5O00463 557 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 PRDX5P30044 214 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 NF2P35240 595 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 FXR2P51116 673 aaKnown RBP eCLIP22.36■■□□□ 1.17
E4F1-204ENST00000564139 PPARDQ03181 441 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 ASIC2Q16515 512 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 ODF2Q5BJF6 829 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 CACNA2D3Q8IZS8 1091 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 SGSM3Q96HU1 749 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 CALR3Q96L12 384 aaKnown RBP22.36■■□□□ 1.17
E4F1-204ENST00000564139 SPZ1Q9BXG8 430 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 AIPL1Q9NZN9 384 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 FBXL5Q9UKA1 691 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 MINPP1Q9UNW1 487 aa22.36■■□□□ 1.17
E4F1-204ENST00000564139 KLRF2D3W0D1 207 aa22.35■■□□□ 1.17
E4F1-204ENST00000564139 CEP104O60308 925 aa22.35■■□□□ 1.17
E4F1-204ENST00000564139 TSPY3P0CV98 308 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms