RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 EFCAB8A8MWE9 144 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 ZNF76P36508 570 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 KIF4BQ2VIQ3 1234 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 FAM160B2Q86V87 743 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 CYP2W1Q8TAV3 490 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 PCMTD1Q96MG8 357 aaPredicted RBP21.65■■□□□ 1.06
CDH5-204ENST00000563425 ARID3AQ99856 593 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 FGFBP2Q9BYJ0 223 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 SIK3Q9Y2K2 1263 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 REXO2Q9Y3B8 237 aaKnown RBP21.65■■□□□ 1.06
CDH5-204ENST00000563425 WNT10BO00744 389 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 FKBP3Q00688 224 aaKnown RBP21.65■■□□□ 1.06
CDH5-204ENST00000563425 ZNF569Q5MCW4 686 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 CCDC174Q6PII3 467 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 SYT2Q8N9I0 419 aaPredicted RBP21.65■■□□□ 1.06
CDH5-204ENST00000563425 PIM2Q9P1W9 311 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 MYO1AQ9UBC5 1043 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 DNM3Q9UQ16 869 aa21.65■■□□□ 1.06
CDH5-204ENST00000563425 CFBP00751 764 aa21.64■■□□□ 1.05
CDH5-204ENST00000563425 PSMC6P62333 389 aa21.64■■□□□ 1.05
CDH5-204ENST00000563425 NBPF9Q3BBW0 867 aa21.64■■□□□ 1.05
CDH5-204ENST00000563425 HERC4Q5GLZ8 1057 aaPredicted RBP21.64■■□□□ 1.05
CDH5-204ENST00000563425 FBXO38Q6PIJ6 1188 aa21.64■■□□□ 1.05
CDH5-204ENST00000563425 TBC1D5Q92609 795 aa21.64■■□□□ 1.05
CDH5-204ENST00000563425 ZNHIT6Q9NWK9 470 aaKnown RBP21.64■■□□□ 1.05
CDH5-204ENST00000563425 TBC1D7Q9P0N9 293 aa21.64■■□□□ 1.05
CDH5-204ENST00000563425 GCOM1H8Y6P7 765 aaPredicted RBP21.63■■□□□ 1.05
CDH5-204ENST00000563425 ABL1P00519 1130 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 KRT18P05783 430 aaKnown RBP21.63■■□□□ 1.05
CDH5-204ENST00000563425 POLR2MP0CAP2 368 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 CDK17Q00537 523 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 CCDC84Q86UT8 332 aaPredicted RBP21.63■■□□□ 1.05
CDH5-204ENST00000563425 UBXN4Q92575 508 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 POLR3CQ9BUI4 534 aaPredicted RBP21.63■■□□□ 1.05
CDH5-204ENST00000563425 FEM1BQ9UK73 627 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 MRPL11Q9Y3B7 192 aaKnown RBP21.63■■□□□ 1.05
CDH5-204ENST00000563425 KIF20AO95235 890 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 ASNSP08243 561 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 TGFB2P61812 414 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 CACNB1Q02641 598 aaPredicted RBP21.63■■□□□ 1.05
CDH5-204ENST00000563425 PPP2R3AQ06190 1150 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 ZYXQ15942 572 aaKnown RBP21.63■■□□□ 1.05
CDH5-204ENST00000563425 CIAPIN1Q6FI81 312 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 SCFD1Q8WVM8 642 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 CEP63Q96MT8 703 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 GLIS2Q9BZE0 524 aaPredicted RBP21.63■■□□□ 1.05
CDH5-204ENST00000563425 COL4A3BPQ9Y5P4 624 aa21.63■■□□□ 1.05
CDH5-204ENST00000563425 LOXHD1Q8IVV2 1947 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 MEIS1O00470 390 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 H2AFXP16104 143 aaPredicted RBP21.62■■□□□ 1.05
CDH5-204ENST00000563425 RAD51AP2Q09MP3 1159 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 PABPC4Q13310 644 aaKnown RBP eCLIP21.62■■□□□ 1.05
CDH5-204ENST00000563425 GIT2Q14161 759 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 SLC35F6Q8N357 371 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 KCTD17Q8N5Z5 321 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 WDR18Q9BV38 432 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 KCTD10Q9H3F6 313 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 MYOZ2Q9NPC6 264 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 EMILIN3Q9NT22 766 aa21.62■■□□□ 1.05
CDH5-204ENST00000563425 TRAF5O00463 557 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 HNRNPH3P31942 346 aaKnown RBP21.61■■□□□ 1.05
CDH5-204ENST00000563425 CCDC170Q8IYT3 715 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 FEZ1Q99689 392 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 CTAGE9A4FU28 777 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 CYLC1P35663 651 aaPredicted RBP21.61■■□□□ 1.05
CDH5-204ENST00000563425 HERVK_113P62684 666 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 TUBB2AQ13885 445 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 ZNF662Q6ZS27 426 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 ZC3H3Q8IXZ2 948 aaKnown RBP21.61■■□□□ 1.05
CDH5-204ENST00000563425 EIF2AK1Q9BQI3 630 aaKnown RBP21.61■■□□□ 1.05
CDH5-204ENST00000563425 TUBB2BQ9BVA1 445 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 FBXO28Q9NVF7 368 aa21.61■■□□□ 1.05
CDH5-204ENST00000563425 EML1O00423 815 aa21.6■■□□□ 1.05
CDH5-204ENST00000563425 KRT83P78385 493 aa21.6■■□□□ 1.05
CDH5-204ENST00000563425 HAUS4Q9H6D7 363 aa21.6■■□□□ 1.05
CDH5-204ENST00000563425 EHMT1Q9H9B1 1298 aa21.6■■□□□ 1.05
CDH5-204ENST00000563425 NHEJ1Q9H9Q4 299 aaPredicted RBP21.6■■□□□ 1.05
CDH5-204ENST00000563425 SHTN1A0MZ66 631 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 PHF20L1A8MW92 1017 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 GNA14O95837 355 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 MARSP56192 900 aaKnown RBP21.59■■□□□ 1.05
CDH5-204ENST00000563425 OTOP1Q7RTM1 612 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 LDHDQ86WU2 507 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 NELFCDQ8IXH7 590 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 SLC5A5Q92911 643 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 REEP2Q9BRK0 252 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 DEFB129Q9H1M3 183 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 TAOK3Q9H2K8 898 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 CDC23Q9UJX2 597 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 PLAGL2Q9UPG8 496 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 EIF3CLB5ME19 914 aaKnown RBP21.59■■□□□ 1.05
CDH5-204ENST00000563425 EPHB6O15197 1021 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 PSMD10O75832 226 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 EYA4O95677 639 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 PTGER2P43116 358 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 CYP4A11Q02928 519 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 EDRF1Q3B7T1 1238 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 CCDC40Q4G0X9 1142 aa21.59■■□□□ 1.05
CDH5-204ENST00000563425 DALRD3Q5D0E6 543 aaKnown RBP21.59■■□□□ 1.05
CDH5-204ENST00000563425 PPP4R3CPQ6ZMV5 832 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms