RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 STAM2O75886 525 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
SNX1-212ENST00000560861 BMP6P22004 513 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 ICAM3P32942 547 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 STX1AQ16623 288 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 LRCH2Q5VUJ6 765 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 C11orf57Q6ZUT1 292 aaPredicted RBP12.69□□□□□ -0.38
SNX1-212ENST00000560861 CEP57L1Q8IYX8 460 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 ANKRD13CQ8N6S4 541 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 SMCR8Q8TEV9 937 aaPredicted RBP12.69□□□□□ -0.38
SNX1-212ENST00000560861 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 CALML4Q96GE6 196 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 HSD17B14Q9BPX1 270 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 ZNF577Q9BSK1 485 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 POLR3CQ9BUI4 534 aaPredicted RBP12.69□□□□□ -0.38
SNX1-212ENST00000560861 UNC45AQ9H3U1 944 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 MAN1B1Q9UKM7 699 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
SNX1-212ENST00000560861 KDM3AQ9Y4C1 1321 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 LOC102724159A0A0B4J2E5 919 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 SPATA31C2B4DYI2 1134 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 MAFGO15525 162 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 GAS7O60861 476 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 ATP9AO75110 1047 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 KCNA2P16389 499 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 RPA1P27694 616 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 CASP1P29466 404 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 INHBEP58166 350 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 NLRP12P59046 1061 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 CCNA1P78396 465 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 MTMR1Q13613 665 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 MORC3Q14149 939 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 PWP2Q15269 919 aaKnown RBP12.68□□□□□ -0.38
SNX1-212ENST00000560861 CNNM4Q6P4Q7 775 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 CATSPER3Q86XQ3 398 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 ABRAQ8N0Z2 381 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 RAD54LQ92698 747 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 ZIC5Q96T25 663 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 PLIN2Q99541 437 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 MMP19Q99542 508 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 TEKT3Q9BXF9 490 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
SNX1-212ENST00000560861 HOOK1Q9UJC3 728 aaKnown RBP12.68□□□□□ -0.38
SNX1-212ENST00000560861 NFASCO94856 1347 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
SNX1-212ENST00000560861 POTEB3A0JP26 581 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 KLRC4O43908 158 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 EIF3JO75822 258 aaKnown RBP12.67□□□□□ -0.38
SNX1-212ENST00000560861 MYL1P05976 194 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 PGK2P07205 417 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 FCER1AP12319 257 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 CCT6AP40227 531 aaKnown RBP12.67□□□□□ -0.38
SNX1-212ENST00000560861 AFMP43652 599 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 TM4SF4P48230 202 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 MRE11P49959 708 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 CUL4BQ13620 913 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 KCTD2Q14681 263 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 IQCB1Q15051 598 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 EPHA7Q15375 998 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 ZNF792Q3KQV3 632 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 DPCR1Q3MIW9 517 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 ANO6Q4KMQ2 910 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 NCAPH2Q6IBW4 605 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 POTEBQ6S5H4 581 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 KCTD17Q8N5Z5 321 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 TRIML1Q8N9V2 468 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 ERMNQ8TAM6 284 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 STAMQ92783 540 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 EIF2AK1Q9BQI3 630 aaKnown RBP12.67□□□□□ -0.38
SNX1-212ENST00000560861 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 TBC1D22BQ9NU19 505 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 ANO10Q9NW15 660 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 ADD3Q9UEY8 706 aaKnown RBP12.67□□□□□ -0.38
SNX1-212ENST00000560861 MGAMO43451 1857 aa12.67□□□□□ -0.38
SNX1-212ENST00000560861 SMC2O95347 1197 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 CAVIN2O95810 425 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 CCNE2O96020 404 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 XRCC6P12956 609 aaKnown RBP eCLIP12.66□□□□□ -0.38
SNX1-212ENST00000560861 MUTP22033 750 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 TAF1CQ15572 869 aaPredicted RBP12.66□□□□□ -0.38
SNX1-212ENST00000560861 STXBP2Q15833 593 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 C17orf99Q6UX52 265 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 LARP4BQ92615 738 aaKnown RBP12.66□□□□□ -0.38
SNX1-212ENST00000560861 SMARCE1Q969G3 411 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 GSDMAQ96QA5 445 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 SENP7Q9BQF6 1050 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 TRIM9Q9C026 710 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 BLZF1Q9H2G9 400 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 CBX8Q9HC52 389 aa12.66□□□□□ -0.38
SNX1-212ENST00000560861 TUFT1Q9NNX1 390 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms