RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 RPN1P04843 607 aaKnown RBP13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 ERCC3P19447 782 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 SFNP31947 248 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 JAK3P52333 1124 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 UBXN2AP68543 259 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 MRPS9P82933 396 aaKnown RBP13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 KRT76Q01546 638 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 EPHA7Q15375 998 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 STXBP2Q15833 593 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 DPCR1Q3MIW9 517 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 HS1BP3Q53T59 392 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 CST9Q5W186 159 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 ABRAQ8N0Z2 381 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 CYP2W1Q8TAV3 490 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 BRI3BPQ8WY22 251 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 PNMA5Q96PV4 448 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 TRIM9Q9C026 710 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 MORF4L1Q9UBU8 362 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 TRPM7Q96QT4 1865 aa13.25□□□□□ -0.29
AC087878.1-201ENST00000560709 NFASCO94856 1347 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 BIN1O00499 593 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 FOXN1O15353 648 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 DKC1O60832 514 aaKnown RBP eCLIP13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 ARP10275 920 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 FCER1AP12319 257 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 MYCLP12524 364 aaPredicted RBP13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 FMR1Q06787 632 aaKnown RBP eCLIP13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 STIM1Q13586 685 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 IQCB1Q15051 598 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 ZNF658Q5TYW1 1059 aaPredicted RBP13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 RGMBQ6NW40 437 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 B3GNT9Q6UX72 402 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 C11orf57Q6ZUT1 292 aaPredicted RBP13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 RASAL3Q86YV0 1011 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 IL31RAQ8NI17 732 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 ERCC4Q92889 916 aaPredicted RBP13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 MMP19Q99542 508 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 EIF2AK1Q9BQI3 630 aaKnown RBP13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 BLOC1S4Q9NUP1 217 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 DNM3Q9UQ16 869 aa13.24□□□□□ -0.29
AC087878.1-201ENST00000560709 SMCHD1A6NHR9 2005 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 GOLGA6L6A8MZA4 724 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 STRNO43815 780 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 RHOBTB3O94955 611 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 TPM3P06753 285 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 EDNRBP24530 442 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 ICAM3P32942 547 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 ALDH5A1P51649 535 aaPredicted RBP13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 ZNF157P51786 506 aaPredicted RBP13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 ASIC1P78348 528 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 MYL5Q02045 173 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 FAM110CQ1W6H9 321 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 COBLL1Q53SF7 1204 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 ZNF746Q6NUN9 644 aaPredicted RBP13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 KCNV1Q6PIU1 500 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 POTEEQ6S8J3 1075 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 UNC13DQ70J99 1090 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 SAPCD2Q86UD0 394 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 SMAP1Q8IYB5 467 aaPredicted RBP13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 GRAMD1CQ8IYS0 662 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 FAM133AQ8N9E0 248 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 PDLIM2Q96JY6 352 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 MTRQ99707 1265 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 HSD17B14Q9BPX1 270 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 SENP7Q9BQF6 1050 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 EXOC1Q9NV70 894 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 TLL2Q9Y6L7 1015 aa13.23□□□□□ -0.29
AC087878.1-201ENST00000560709 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 WDR64B1ANS9 1081 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 MED24O75448 989 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 SLC10A3P09131 477 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 TGFB3P10600 412 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 SREBF2Q12772 1141 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 PSMD2Q13200 908 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 CUL4BQ13620 913 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 SARM1Q6SZW1 724 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 MIER3Q7Z3K6 550 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 LUZP1Q86V48 1076 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 ENOX1Q8TC92 643 aaKnown RBP13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 NACC1Q96RE7 527 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 PLIN2Q99541 437 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 NUDT12Q9BQG2 462 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 RNF216Q9NWF9 866 aaPredicted RBP13.22□□□□□ -0.29
AC087878.1-201ENST00000560709 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
AC087878.1-201ENST00000560709 ASB14A6NK59 587 aa13.21□□□□□ -0.29
AC087878.1-201ENST00000560709 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
AC087878.1-201ENST00000560709 KIF20AO95235 890 aa13.21□□□□□ -0.29
AC087878.1-201ENST00000560709 LYPLA2O95372 231 aa13.21□□□□□ -0.29
AC087878.1-201ENST00000560709 EYA4O95677 639 aa13.21□□□□□ -0.29
AC087878.1-201ENST00000560709 P4HBP07237 508 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms