RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SPATA33Q96N06 139 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 UIMC1Q96RL1 719 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 BCAS3Q9H6U6 928 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 TBC1D22BQ9NU19 505 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
SNX6-206ENST00000556162 NFASCO94856 1347 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 A6NJR5 290 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 KBTBD13C9JR72 458 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 DNM1LO00429 736 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 MSH4O15457 936 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 SLC37A4O43826 429 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 FARP2O94887 1054 aaPredicted RBP16.03■□□□□ 0.16
SNX6-206ENST00000556162 CST5P28325 142 aaPredicted RBP16.03■□□□□ 0.16
SNX6-206ENST00000556162 IRX5P78411 483 aaPredicted RBP16.03■□□□□ 0.16
SNX6-206ENST00000556162 BEX3Q00994 111 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 TTC38Q5R3I4 469 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 PCSK9Q8NBP7 692 aaKnown RBP16.03■□□□□ 0.16
SNX6-206ENST00000556162 AFG1LQ8WV93 481 aa16.03■□□□□ 0.16
SNX6-206ENST00000556162 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
SNX6-206ENST00000556162 MYADML2A6NDP7 307 aa16.02■□□□□ 0.16
SNX6-206ENST00000556162 NOP56O00567 594 aaKnown RBP16.02■□□□□ 0.16
SNX6-206ENST00000556162 CTAGE5O15320 804 aa16.02■□□□□ 0.16
SNX6-206ENST00000556162 MCM7P33993 719 aa16.02■□□□□ 0.16
SNX6-206ENST00000556162 ITGB3BPQ13352 177 aaPredicted RBP16.02■□□□□ 0.16
SNX6-206ENST00000556162 ZNF174Q15697 407 aa16.02■□□□□ 0.16
SNX6-206ENST00000556162 KCNA10Q16322 511 aa16.02■□□□□ 0.16
SNX6-206ENST00000556162 PPTC7Q8NI37 304 aa16.02■□□□□ 0.16
SNX6-206ENST00000556162 TSEN34Q9BSV6 310 aaKnown RBP16.02■□□□□ 0.16
SNX6-206ENST00000556162 JPH1Q9HDC5 661 aaPredicted RBP16.02■□□□□ 0.16
SNX6-206ENST00000556162 TBX3O15119 743 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 NEMFO60524 1076 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 BAG4O95429 457 aaKnown RBP16.01■□□□□ 0.15
SNX6-206ENST00000556162 TOB1P50616 345 aaPredicted RBP16.01■□□□□ 0.15
SNX6-206ENST00000556162 SP4Q02446 784 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
SNX6-206ENST00000556162 HSDL1Q3SXM5 330 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 SLC5A5Q92911 643 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 FAM20AQ96MK3 541 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 RIT2Q99578 217 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 SLC9A2Q9UBY0 812 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 TCEAL9Q9UHQ7 104 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 MOXD2PA6NHM9 499 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 WNT7AO00755 349 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 DHX15O43143 795 aaKnown RBP16.01■□□□□ 0.15
SNX6-206ENST00000556162 PPFIA4O75335 1185 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 ZSCAN22P10073 491 aaPredicted RBP16.01■□□□□ 0.15
SNX6-206ENST00000556162 RESTQ13127 1097 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 DGKDQ16760 1214 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 LRCH2Q5VUJ6 765 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 CCSAPQ6IQ19 270 aaPredicted RBP16.01■□□□□ 0.15
SNX6-206ENST00000556162 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 ETNPPLQ8TBG4 499 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 KCNMB3Q9NPA1 279 aa16.01■□□□□ 0.15
SNX6-206ENST00000556162 DDX39AO00148 427 aaKnown RBP16■□□□□ 0.15
SNX6-206ENST00000556162 KPNA6O60684 536 aa16■□□□□ 0.15
SNX6-206ENST00000556162 GAS7O60861 476 aa16■□□□□ 0.15
SNX6-206ENST00000556162 ASGR1P07306 291 aa16■□□□□ 0.15
SNX6-206ENST00000556162 MMP3P08254 477 aa16■□□□□ 0.15
SNX6-206ENST00000556162 CALCRLQ16602 461 aa16■□□□□ 0.15
SNX6-206ENST00000556162 SLFN12Q8IYM2 578 aa16■□□□□ 0.15
SNX6-206ENST00000556162 TEKT3Q9BXF9 490 aa16■□□□□ 0.15
SNX6-206ENST00000556162 POLR3EQ9NVU0 708 aa16■□□□□ 0.15
SNX6-206ENST00000556162 PCDHB6Q9Y5E3 794 aa16■□□□□ 0.15
SNX6-206ENST00000556162 MYL3P08590 195 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 ACLYP53396 1101 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 NBR1Q14596 966 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 FOXD4L5Q5VV16 416 aaPredicted RBP15.99■□□□□ 0.15
SNX6-206ENST00000556162 FOXD4L4Q8WXT5 416 aaPredicted RBP15.99■□□□□ 0.15
SNX6-206ENST00000556162 SEPT1Q8WYJ6 367 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 GJA10Q969M2 543 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 PAWRQ96IZ0 340 aaKnown RBP15.99■□□□□ 0.15
SNX6-206ENST00000556162 GPR20Q99678 358 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 PSMD10O75832 226 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 MNX1P50219 401 aaPredicted RBP15.99■□□□□ 0.15
SNX6-206ENST00000556162 KRT76Q01546 638 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 PKP1Q13835 747 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 NECAB2Q7Z6G3 386 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 HAS1Q92839 578 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 GLT1D1Q96MS3 346 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 PHF24Q9UPV7 400 aa15.99■□□□□ 0.15
SNX6-206ENST00000556162 CABYRO75952 493 aa15.98■□□□□ 0.15
SNX6-206ENST00000556162 ACTR2P61160 394 aa15.98■□□□□ 0.15
SNX6-206ENST00000556162 ZNF746Q6NUN9 644 aaPredicted RBP15.98■□□□□ 0.15
SNX6-206ENST00000556162 CXCL17Q6UXB2 119 aa15.98■□□□□ 0.15
SNX6-206ENST00000556162 DIS3LQ8TF46 1054 aaKnown RBP15.98■□□□□ 0.15
SNX6-206ENST00000556162 FERMT2Q96AC1 680 aa15.98■□□□□ 0.15
SNX6-206ENST00000556162 VTI1AQ96AJ9 217 aa15.98■□□□□ 0.15
SNX6-206ENST00000556162 MTMR9Q96QG7 549 aa15.98■□□□□ 0.15
SNX6-206ENST00000556162 SENP6Q9GZR1 1112 aaPredicted RBP15.98■□□□□ 0.15
SNX6-206ENST00000556162 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.98■□□□□ 0.15
SNX6-206ENST00000556162 PCDHA12Q9UN75 941 aa15.98■□□□□ 0.15
SNX6-206ENST00000556162 TELO2Q9Y4R8 837 aa15.98■□□□□ 0.15
SNX6-206ENST00000556162 GSTTP1A0A1W2PQM5 241 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 CCNE2O96020 404 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 F13A1P00488 732 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 HOXD8P13378 290 aaPredicted RBP15.97■□□□□ 0.15
SNX6-206ENST00000556162 TCF7P36402 384 aaPredicted RBP15.97■□□□□ 0.15
SNX6-206ENST00000556162 TXKP42681 527 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 PURAQ00577 322 aaKnown RBP15.97■□□□□ 0.15
SNX6-206ENST00000556162 PTGDRQ13258 359 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms