RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 WHRNQ9P202 907 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 KCNH3Q9ULD8 1083 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 LEMD3Q9Y2U8 911 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 PRKAB1Q9Y478 270 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 PTCH2Q9Y6C5 1203 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 RIC1Q4ADV7 1423 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 FER1L6Q2WGJ9 1857 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 KIF7Q2M1P5 1343 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 UBN2Q6ZU65 1347 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 CLSPNQ9HAW4 1339 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 DLEC1Q9Y238 1755 aa3.15□□□□□ -1.91
CPSF6-207ENST00000551516 SLX4Q8IY92 1834 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 COL11A2P13942 1736 aaPredicted RBP3.14□□□□□ -1.91
CPSF6-207ENST00000551516 COL6A3P12111 3177 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 TRAV20A0A0B4J274 112 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 SHTN1A0MZ66 631 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 KRBA1A5PL33 1030 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 YDJCA8MPS7 323 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 PPM1GO15355 546 aaPredicted RBP3.14□□□□□ -1.91
CPSF6-207ENST00000551516 ASMTLO95671 621 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 FAM153BP0C7A2 387 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 EPS15P42566 896 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 KIR3DL1P43629 444 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 LBX1P52954 281 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 CAP1Q01518 475 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 CDK5R2Q13319 367 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 SQSTM1Q13501 440 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 TMEM67Q5HYA8 995 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 SFRP5Q5T4F7 317 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 POMZP3Q6PJE2 187 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 SEZ6L2Q6UXD5 910 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 SAPCD2Q86UD0 394 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 ANKRD13AQ8IZ07 590 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 DNAJB8Q8NHS0 232 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 VWCEQ96DN2 955 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 MASTLQ96GX5 879 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 HHIPL1Q96JK4 782 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 TBC1D32Q96NH3 1257 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 FEZ1Q99689 392 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 FAM83CQ9BQN1 747 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 AARSD1Q9BTE6 412 aaKnown RBP3.14□□□□□ -1.91
CPSF6-207ENST00000551516 KLHL25Q9H0H3 589 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 DDX21Q9NR30 783 aaKnown RBP eCLIP3.14□□□□□ -1.91
CPSF6-207ENST00000551516 C1GALT1Q9NS00 363 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 GTF2IRD1Q9UHL9 959 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 AKT3Q9Y243 479 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 DIS3Q9Y2L1 958 aaKnown RBP3.14□□□□□ -1.91
CPSF6-207ENST00000551516 RAXQ9Y2V3 346 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF451Q9Y4E5 1061 aa3.14□□□□□ -1.91
CPSF6-207ENST00000551516 AFDNP55196 1824 aaKnown RBP3.14□□□□□ -1.91
CPSF6-207ENST00000551516 TNRC6CQ9HCJ0 1690 aaKnown RBP3.14□□□□□ -1.91
CPSF6-207ENST00000551516 SCN11AQ9UI33 1791 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 A0A087WZG4 1122 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 A0A1W2PQU0 124 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 H0YIN7 160 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 TRAF5O00463 557 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 DYNC1LI2O43237 492 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-207ENST00000551516 CBFA2T2O43439 604 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 DNAJC6O75061 913 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 NTSR2O95665 410 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 CBX7O95931 251 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 EOMESO95936 686 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 ITGAVP06756 1048 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 HMOX1P09601 288 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 FAM87AP0C7U9 286 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 GATA4P43694 442 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 TNNT2P45379 298 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-207ENST00000551516 PIP4K2AP48426 406 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-207ENST00000551516 GYS2P54840 703 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 PPP2R2AP63151 447 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 CYP27A1Q02318 531 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 NBPF9Q3BBW0 867 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 CYP27C1Q4G0S4 372 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 OGFOD3Q6PK18 319 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 FILIP1Q7Z7B0 1213 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 CNTROBQ8N137 903 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 SYNE4Q8N205 404 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 TP53INP1Q96A56 240 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 RCC1LQ96I51 464 aaKnown RBP3.13□□□□□ -1.91
CPSF6-207ENST00000551516 DHRS4Q9BTZ2 278 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 DSCC1Q9BVC3 393 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 DUSP23Q9BVJ7 150 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 TAOK3Q9H2K8 898 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 SPC25Q9HBM1 224 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 GP6Q9HCN6 339 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 PRDM5Q9NQX1 630 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-207ENST00000551516 ZNF277Q9NRM2 450 aaPredicted RBP3.13□□□□□ -1.91
CPSF6-207ENST00000551516 PRR13Q9NZ81 148 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 STOML1Q9UBI4 398 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 SUSD2Q9UGT4 822 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 VIRMAQ69YN4 1812 aaKnown RBP3.13□□□□□ -1.91
CPSF6-207ENST00000551516 WDR33Q9C0J8 1336 aaKnown RBP3.13□□□□□ -1.91
CPSF6-207ENST00000551516 PDE4DIPQ5VU43 2346 aa3.13□□□□□ -1.91
CPSF6-207ENST00000551516 IBTKQ9P2D0 1353 aaPredicted RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 DUOX1Q9NRD9 1551 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 SIPA1L3O60292 1781 aaPredicted RBP3.12□□□□□ -1.91
CPSF6-207ENST00000551516 SCN7AQ01118 1682 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 TRBV23-1A0A0A0MS06 115 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 GNAT3A8MTJ3 354 aa3.12□□□□□ -1.91
CPSF6-207ENST00000551516 C1QTNF9BB2RNN3 333 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms