RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 GNAQP50148 359 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CDR1P51861 262 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 HDLBPQ00341 1268 aaKnown RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 PDE4BQ07343 736 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 RASA3Q14644 834 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CCDC57Q2TAC2 916 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 NUTM2GQ5VZR2 741 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 BLOC1S2Q6QNY1 142 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 SYNE3Q6ZMZ3 975 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 Q6ZUG5 572 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 FOXP4Q8IVH2 680 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 FAM177A1Q8N128 213 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CFAP61Q8NHU2 1237 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 KCNG4Q8TDN1 519 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CYFIP2Q96F07 1278 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CITED4Q96RK1 184 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 MMS19Q96T76 1030 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CDC5LQ99459 802 aaKnown RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 LZTS2Q9BRK4 669 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 FTOQ9C0B1 505 aaKnown RBP eCLIP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 RANBP17Q9H2T7 1088 aaKnown RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 PAPOLBQ9NRJ5 636 aaKnown RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 WDR35Q9P2L0 1181 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 CTNNAL1Q9UBT7 734 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 SLC12A6Q9UHW9 1150 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 HOOK1Q9UJC3 728 aaKnown RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 SLC12A4Q9UP95 1085 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 SPG7Q9UQ90 795 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 LEMD3Q9Y2U8 911 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 REXO2Q9Y3B8 237 aaKnown RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 NCAPD2Q15021 1401 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 ABCC1P33527 1531 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 MED1Q15648 1581 aaPredicted RBP5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 ITSN1Q15811 1721 aa5.88□□□□□ -1.47
LSM3P2-201ENST00000551246 TMEM221A6NGB7 291 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ZBTB42B2RXF5 422 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 SHISA8B8ZZ34 492 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 HIP1O00291 1037 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 PRPF3O43395 683 aaKnown RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 OIP5O43482 229 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 TRAPPC3O43617 180 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 MMP20O60882 483 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 MFAP3LO75121 409 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ARHGEF15O94989 841 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 BAG3O95817 575 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 RPLP1P05386 114 aaKnown RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 MYL1P05976 194 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 RARAP10276 462 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 GNAT1P11488 350 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 PRLRP16471 622 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ZKSCAN1P17029 563 aaPredicted RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 RXRBP28702 533 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ADKP55263 362 aaKnown RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ZBED6P86452 979 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 CKAP4Q07065 602 aaKnown RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 IFT88Q13099 833 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ITGB3BPQ13352 177 aaPredicted RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 CFAP100Q494V2 611 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 CCDC178Q5BJE1 867 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ZMYM1Q5SVZ6 1142 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 CCDC121Q6ZUS5 278 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 G2E3Q7L622 706 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ARMC9Q7Z3E5 817 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 CEP57Q86XR8 500 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 TMTC1Q8IUR5 882 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 EIF1ADQ8N9N8 165 aaKnown RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 MLKLQ8NB16 471 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 SPATA20Q8TB22 786 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 AZIN2Q96A70 460 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 PNMA5Q96PV4 448 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 SDF4Q9BRK5 362 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 USP44Q9H0E7 712 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 CHRDQ9H2X0 955 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ZWILCHQ9H900 591 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ELP3Q9H9T3 547 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 LRRC4BQ9NT99 713 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 FNDC3AQ9Y2H6 1198 aaKnown RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 TAF6LQ9Y6J9 622 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 RFX7Q2KHR2 1363 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 CARMIL3Q8ND23 1372 aa5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 CEP170BQ9Y4F5 1589 aaPredicted RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 ARHGEF28Q8N1W1 1705 aaKnown RBP5.87□□□□□ -1.47
LSM3P2-201ENST00000551246 MROH2AA6NES4 1674 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 CAMSAP1Q5T5Y3 1602 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 MLH3Q9UHC1 1453 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 ZMYM6O95789 1325 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 ANO9A1A5B4 782 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 FRMD3A2A2Y4 597 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 GMNCA6NCL1 334 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 ZNF233A6NK53 670 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 RASSF10A6NK89 507 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 HMGB1P1B2RPK0 211 aaPredicted RBP5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 F8W031 263 aaPredicted RBP5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 STXBP3O00186 592 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 IFIT3O14879 490 aaKnown RBP5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 LUC7L3O95232 432 aaKnown RBP5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 SERPINC1P01008 464 aa5.86□□□□□ -1.47
LSM3P2-201ENST00000551246 BCRP11274 1271 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms