RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SUDS3Q9H7L9 328 aaPredicted RBP17.13■□□□□ 0.33
RBFOX1-212ENST00000550418 CREB3O43889 395 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 GFPT2O94808 682 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 ACSL3O95573 720 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 IRAK1P51617 712 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 MMS19Q96T76 1030 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 SNX24Q9Y343 169 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 EXOC1LA0A1B0GW35 172 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 TRIM49BA6NDI0 452 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 GAS7O60861 476 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 PDHA1P08559 390 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 HNRNPLLQ8WVV9 542 aaKnown RBP17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 CCT8L2Q96SF2 557 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 TAF1DQ9H5J8 278 aaPredicted RBP17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 YWHAGP61981 247 aaKnown RBP eCLIP17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 HDLBPQ00341 1268 aaKnown RBP17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 KAZNQ674X7 775 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 BATF3Q9NR55 127 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 DKC1O60832 514 aaKnown RBP eCLIP17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 CFBP00751 764 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 NSFP46459 744 aaKnown RBP17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 BSPRYQ5W0U4 402 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 KCNV2Q8TDN2 545 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 VTI1AQ96AJ9 217 aa17.12■□□□□ 0.33
RBFOX1-212ENST00000550418 PODXLO00592 558 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 MDH1P40925 334 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 IRX1P78414 480 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 ZNF653Q96CK0 615 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 C1orf112Q9NSG2 853 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 HADHQ16836 314 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 CCNI2Q6ZMN8 369 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 TAB3Q8N5C8 712 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 INTUQ9ULD6 942 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 PRCPP42785 496 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 MYL7Q01449 175 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 PSMD2Q13200 908 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 ZNF473Q8WTR7 871 aaKnown RBP17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 LRRC1Q9BTT6 524 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 HPCAL4Q9UM19 191 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 TMED1Q13445 227 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 NXNQ6DKJ4 435 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 RASGRP2Q7LDG7 609 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 FAM186BQ8IYM0 893 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 SH2D3CQ8N5H7 860 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 RUBCNQ92622 972 aa17.11■□□□□ 0.33
RBFOX1-212ENST00000550418 SPECC1L-ADORA2AF8WAN1 911 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 FOXN1O15353 648 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 NCK2O43639 380 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 GYG1P46976 350 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 ZBTB17Q13105 803 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 GABPB2Q8TAK5 448 aaPredicted RBP17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 YY1AP1Q9H869 796 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 HNRNPH1P31943 449 aaKnown RBP17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 ESRRGP62508 458 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 FAM47EQ6ZV65 393 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 CERKQ8TCT0 537 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 CCDC127Q96BQ5 260 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 FUT8Q9BYC5 575 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 LRRC53A6NM62 1247 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 DAPK3O43293 454 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 LRRN2O75325 713 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 DYNC1I2Q13409 638 aaKnown RBP17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 METTL16Q86W50 562 aaKnown RBP17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 ETNK1Q9HBU6 452 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 GCNT4Q9P109 453 aa17.1■□□□□ 0.33
RBFOX1-212ENST00000550418 A0A1B0GTH6 734 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 GRID2IPA4D2P6 1211 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 GIPC1O14908 333 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 HAUS1Q96CS2 278 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 PFDN4Q9NQP4 134 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 MAPK4P31152 587 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 TC2NQ8N9U0 490 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 EMILIN3Q9NT22 766 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 K7ENM7 598 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 RNF8O76064 485 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 UFL1O94874 794 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 ZWINTO95229 277 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 CHGBP05060 677 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 CYP4A11Q02928 519 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 TMCO4Q5TGY1 634 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 GREM2Q9H772 168 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 IFT122Q9HBG6 1241 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 SNX12Q9UMY4 172 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 STK36Q9NRP7 1315 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 DNAJC8O75937 253 aaPredicted RBP17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 MT-ND3P03897 115 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 PABPC4Q13310 644 aaKnown RBP eCLIP17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 SPARCL1Q14515 664 aa17.09■□□□□ 0.33
RBFOX1-212ENST00000550418 OSBPL1AQ9BXW6 950 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms