RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 GBF1Q92538 1859 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 PPM1GO15355 546 aaPredicted RBP2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 C1QL1O75973 258 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 WISP1O95388 367 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 GP1BBP13224 206 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 POU3F2P20265 443 aaPredicted RBP2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 RGS2P41220 211 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 GCLCP48506 637 aaPredicted RBP2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 DPYDQ12882 1025 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 MOGSQ13724 837 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 HLFQ16534 295 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 PTPROQ16827 1216 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 TIGD5Q53EQ6 642 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 COLEC12Q5KU26 742 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 DACT2Q5SW24 774 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 STRIP1Q5VSL9 837 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 SUSD4Q5VX71 490 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 CEP135Q66GS9 1140 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 PAOXQ6QHF9 649 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 PPP1R42Q7Z4L9 355 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 TREML1Q86YW5 311 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 KIAA0825Q8IV33 1275 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 ANKMY2Q8IV38 441 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 TRIM42Q8IWZ5 723 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 POU5F2Q8N7G0 328 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 OR13H1Q8NG92 308 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 TDRD7Q8NHU6 1098 aaKnown RBP2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 PHOSPHO2Q8TCD6 241 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 FAM200AQ8TCP9 573 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 GDPD5Q8WTR4 605 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 JARID2Q92833 1246 aaPredicted RBP2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 GATA6Q92908 595 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 PMEPA1Q969W9 287 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 HOOK2Q96ED9 719 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 FAM46AQ96IP4 442 aaKnown RBP2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 NSUN5Q96P11 429 aaKnown RBP2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 WRNIP1Q96S55 665 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 UBL7Q96S82 380 aaPredicted RBP2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 RTP3Q9BQQ7 232 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 SLC12A5Q9H2X9 1139 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 SUGCTQ9HAC7 445 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 KLK14Q9P0G3 267 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 TBX21Q9UL17 535 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 PAXBP1Q9Y5B6 917 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 DUOX1Q9NRD9 1551 aa2.95□□□□□ -1.94
TRAV1-1-201ENST00000542354 UTYO14607 1347 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 SCN9AQ15858 1988 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 RELNP78509 3460 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 DDX60Q8IY21 1712 aaKnown RBP2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L15C9J2P7 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L10C9JJH3 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L13C9JLJ4 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L12C9JPN9 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L11C9JVI0 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L21D6R901 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L18D6R9N7 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L22D6RA61 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L17D6RBQ6 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L19D6RCP7 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L20D6RJB6 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 H3BRJ5 948 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 LINC01387J3KSC0 135 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 FSCN2O14926 492 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 MMP20O60882 483 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 UFL1O94874 794 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 BMP3P12645 472 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 AOC1P19801 751 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 TGM1P22735 817 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 TNNI2P48788 182 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP17L24Q0WX57 530 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 SERINC3Q13530 473 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 COL19A1Q14993 1142 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 CLUL1Q15846 466 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 NCAPG2Q86XI2 1143 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 CCAR1Q8IX12 1150 aaKnown RBP2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 TP53INP2Q8IXH6 220 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 STK11IPQ8N1F8 1099 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 AGGF1Q8N302 714 aaeCLIP2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 ZNF843Q8N446 348 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 LSM14AQ8ND56 463 aaKnown RBP2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 FLCNQ8NFG4 579 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 SHKBP1Q8TBC3 707 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 MRPL38Q96DV4 380 aaKnown RBP2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 LRIG1Q96JA1 1093 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 RPGRIP1Q96KN7 1286 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 SLC9A7Q96T83 725 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 MPHOSPH9Q99550 1183 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 SLC38A3Q99624 504 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 RUSC1Q9BVN2 902 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 MXD3Q9BW11 206 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 ADGRE2Q9UHX3 823 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 CD207Q9UJ71 328 aa2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 MAFBQ9Y5Q3 323 aaPredicted RBP2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 IBTKQ9P2D0 1353 aaPredicted RBP2.94□□□□□ -1.94
TRAV1-1-201ENST00000542354 MROH7Q68CQ1 1323 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PHIPQ8WWQ0 1821 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 ZFHX3Q15911 3703 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 DOPEY2Q9Y3R5 2298 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 HMX2A2RU54 273 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 MEGF11A6BM72 1044 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms