RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 NEDD9Q14511 834 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 LETM2Q2VYF4 491 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 CCDC144BQ3MJ40 725 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 MYSM1Q5VVJ2 828 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 PLA2G4DQ86XP0 818 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 TRPV1Q8NER1 839 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 EMID1Q96A84 441 aaPredicted RBP13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 LENG9Q96B70 501 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 ZNF333Q96JL9 665 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 FAM20AQ96MK3 541 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 WDR11Q9BZH6 1224 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 MCOLN1Q9GZU1 580 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 KCNH7Q9NS40 1196 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 DDX41Q9UJV9 622 aaKnown RBP13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 MORC2Q9Y6X9 1032 aaPredicted RBP13.41□□□□□ -0.26
CYB561A3-214ENST00000540139 F13A1P00488 732 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 SSTR3P32745 418 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 TOB1P50616 345 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 TNFAIP2Q03169 654 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 TRIM32Q13049 653 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 PRR16Q569H4 304 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 TTC38Q5R3I4 469 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 PRAMEF19Q5SWL8 479 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 SEPT14Q6ZU15 432 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 EEPD1Q7L9B9 569 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 FBXO16Q8IX29 292 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 CYP2W1Q8TAV3 490 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 SH3TC2Q8TF17 1288 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 RIT2Q99578 217 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 PAK6Q9NQU5 681 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 GNEQ9Y223 722 aaKnown RBP13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 MRVI1Q9Y6F6 885 aa13.4□□□□□ -0.26
CYB561A3-214ENST00000540139 NFASCO94856 1347 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 HTTP42858 3142 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 LAD1O00515 517 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 CCNT1O60563 726 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 TXNP10599 105 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 SLFN12Q8IYM2 578 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 AGO4Q9HCK5 861 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 KCNMB3Q9NPA1 279 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 PDGFCQ9NRA1 345 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 TBC1D22BQ9NU19 505 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 DDX20Q9UHI6 824 aaKnown RBP13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 ZDHHC9Q9Y397 364 aa13.39□□□□□ -0.27
CYB561A3-214ENST00000540139 IPO5O00410 1097 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 TDP2O95551 362 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 GH1P01241 217 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 GJB1P08034 283 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 ARP10275 920 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 RARBP10826 455 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 KCNA2P16389 499 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 SMPD1P17405 629 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 CCND3P30281 292 aaPredicted RBP13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 ADCYAP1R1P41586 468 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 PKP1Q13835 747 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 CELF3Q5SZQ8 465 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 METTL7BQ6UX53 244 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 FERMT3Q86UX7 667 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 ETNPPLQ8TBG4 499 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 SLC5A5Q92911 643 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 ZNF396Q96N95 335 aaPredicted RBP13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 MTMR9Q96QG7 549 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 UPF3AQ9H1J1 476 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 CHMP5Q9NZZ3 219 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 CEP131Q9UPN4 1083 aa13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 DDX49Q9Y6V7 483 aaKnown RBP13.38□□□□□ -0.27
CYB561A3-214ENST00000540139 KIAA1217Q5T5P2 1943 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 MSH4O15457 936 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 NEMFO60524 1076 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 ARIH2O95376 493 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 CCL5P13501 91 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 UBA1P22314 1058 aaKnown RBP13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 PRPHP41219 470 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 GJA9P57773 515 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 ARL6IP4Q66PJ3 421 aaKnown RBP13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 LHX8Q68G74 356 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 C4orf32Q8N8J7 132 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 UNC93B1Q9H1C4 597 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 SPC25Q9HBM1 224 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 POLR3EQ9NVU0 708 aa13.37□□□□□ -0.27
CYB561A3-214ENST00000540139 DHX15O43143 795 aaKnown RBP13.36□□□□□ -0.27
CYB561A3-214ENST00000540139 SLC37A4O43826 429 aa13.36□□□□□ -0.27
CYB561A3-214ENST00000540139 KPNA6O60684 536 aa13.36□□□□□ -0.27
CYB561A3-214ENST00000540139 ATP9AO75110 1047 aa13.36□□□□□ -0.27
CYB561A3-214ENST00000540139 PPFIA4O75335 1185 aa13.36□□□□□ -0.27
CYB561A3-214ENST00000540139 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms