RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ZNF576Q9H609 170 aa17.19■□□□□ 0.34
RAB40B-202ENST00000538809 COL4A4P53420 1690 aaPredicted RBP17.19■□□□□ 0.34
RAB40B-202ENST00000538809 CHD9Q3L8U1 2897 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 NID2Q14112 1375 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 SPDYE3A6NKU9 549 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 FOSL2P15408 326 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 RFC2P35250 354 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 NAPAP54920 295 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 NEDD9Q14511 834 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 METTL7BQ6UX53 244 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 Q6ZUG5 572 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 TRIM50Q86XT4 487 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 CAGE1Q8TC20 777 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 AFAP1L1Q8TED9 768 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 WNT8BQ93098 351 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 PGBD1Q96JS3 809 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 FTOQ9C0B1 505 aaKnown RBP eCLIP17.18■□□□□ 0.34
RAB40B-202ENST00000538809 PKD2L1Q9P0L9 805 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 PCDHA6Q9UN73 950 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 YBX2Q9Y2T7 364 aaKnown RBP17.18■□□□□ 0.34
RAB40B-202ENST00000538809 PCDHA8Q9Y5H6 950 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 SLC4A7Q9Y6M7 1214 aa17.18■□□□□ 0.34
RAB40B-202ENST00000538809 MYH9P35579 1960 aaKnown RBP17.18■□□□□ 0.34
RAB40B-202ENST00000538809 RPS6KB1P23443 525 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 RAB30Q15771 203 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 XRRA1Q6P2D8 792 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 LRRC8DQ7L1W4 858 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 NLRX1Q86UT6 975 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 MAFAQ8NHW3 353 aaPredicted RBP17.17■□□□□ 0.34
RAB40B-202ENST00000538809 BRF1Q92994 677 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 GPR20Q99678 358 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 USP26Q9BXU7 913 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 MSRAQ9UJ68 235 aa17.17■□□□□ 0.34
RAB40B-202ENST00000538809 V9GY48 417 aaPredicted RBP17.17■□□□□ 0.34
RAB40B-202ENST00000538809 UNC80Q8N2C7 3258 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 PRUNE2Q8WUY3 3088 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 H3BRB1 525 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 STXBP3O00186 592 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 CKBP12277 381 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 ACTN1P12814 892 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 MYOGP15173 224 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 SELPP16109 830 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 ATP2A2P16615 1042 aaKnown RBP17.16■□□□□ 0.34
RAB40B-202ENST00000538809 ITGB5P18084 799 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.34
RAB40B-202ENST00000538809 ADCY7P51828 1080 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 PTK7Q13308 1070 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 UTP14CQ5TAP6 766 aaKnown RBP17.16■□□□□ 0.34
RAB40B-202ENST00000538809 GPRASP2Q96D09 838 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 TUT1Q9H6E5 874 aaKnown RBP17.16■□□□□ 0.34
RAB40B-202ENST00000538809 CHD7Q9P2D1 2997 aa17.16■□□□□ 0.34
RAB40B-202ENST00000538809 ATP9AO75110 1047 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 SMIM10L2AP0DMW4 78 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 SMIM10L2BP0DMW5 78 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 KCNA2P16389 499 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 ADD1P35611 737 aaKnown RBP17.15■□□□□ 0.34
RAB40B-202ENST00000538809 RBL2Q08999 1139 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 GPNMBQ14956 572 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 TRIM71Q2Q1W2 868 aaKnown RBP17.15■□□□□ 0.34
RAB40B-202ENST00000538809 PPP1R18Q6NYC8 613 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 EHMT1Q9H9B1 1298 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 RIC8AQ9NPQ8 531 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 UBIAD1Q9Y5Z9 338 aa17.15■□□□□ 0.34
RAB40B-202ENST00000538809 C17orf102A2RUQ5 167 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 PSMA5P28066 241 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 EVCP57679 992 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 MTMR1Q13613 665 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 TCTN1Q2MV58 587 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 ZNF618Q5T7W0 954 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 SENP7Q9BQF6 1050 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 ANO3Q9BYT9 981 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 PRDM12Q9H4Q4 367 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 ZSWIM6Q9HCJ5 1215 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 TMEM260Q9NX78 707 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 BARHL2Q9NY43 387 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 EVPLQ92817 2033 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
RAB40B-202ENST00000538809 SMCO2A6NFE2 343 aa17.13■□□□□ 0.33
RAB40B-202ENST00000538809 hCG_1984214I3L0E3 225 aa17.13■□□□□ 0.33
RAB40B-202ENST00000538809 NBNO60934 754 aa17.13■□□□□ 0.33
RAB40B-202ENST00000538809 TRAF7Q6Q0C0 670 aa17.13■□□□□ 0.33
RAB40B-202ENST00000538809 SERINC5Q86VE9 423 aa17.13■□□□□ 0.33
RAB40B-202ENST00000538809 ZNF713Q8N859 430 aaPredicted RBP17.13■□□□□ 0.33
RAB40B-202ENST00000538809 ATP6V0A1Q93050 837 aa17.13■□□□□ 0.33
RAB40B-202ENST00000538809 CDHR1Q96JP9 859 aa17.13■□□□□ 0.33
RAB40B-202ENST00000538809 SLC28A3Q9HAS3 691 aa17.13■□□□□ 0.33
RAB40B-202ENST00000538809 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
RAB40B-202ENST00000538809 TREHO43280 583 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 PPFIA3O75145 1194 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 HOXC8P31273 242 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 TCF7P36402 384 aaPredicted RBP17.12■□□□□ 0.33
RAB40B-202ENST00000538809 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
RAB40B-202ENST00000538809 MBTPS1Q14703 1052 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 PFKFB3Q16875 520 aaPredicted RBP17.12■□□□□ 0.33
RAB40B-202ENST00000538809 PPP2R2DQ66LE6 453 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 RUFY3Q7L099 469 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 TEX2Q8IWB9 1127 aa17.12■□□□□ 0.33
RAB40B-202ENST00000538809 GIMAP8Q8ND71 665 aaPredicted RBP17.12■□□□□ 0.33
RAB40B-202ENST00000538809 SLC9A7Q96T83 725 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms