RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ZBTB5O15062 677 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 ECM2O94769 699 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-203ENST00000535977 NPR1P16066 1061 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 AMPD2Q01433 879 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 TMEM119Q4V9L6 283 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 MIIPQ5JXC2 388 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 MRIQ9BWK5 157 aa19.8■□□□□ 0.76
RAB40C-203ENST00000535977 ZMYND10O75800 440 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 SNX29Q8TEQ0 813 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 TEKT1Q969V4 418 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 PCMTD1Q96MG8 357 aaPredicted RBP19.79■□□□□ 0.76
RAB40C-203ENST00000535977 TSGA10Q9BZW7 698 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 NT5C3AQ9H0P0 336 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 SEMA6BQ9H3T3 888 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 DDX4Q9NQI0 724 aaKnown RBP19.79■□□□□ 0.76
RAB40C-203ENST00000535977 ODF2LQ9ULJ1 636 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 GUCA1BQ9UMX6 200 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 RIMBP2O15034 1052 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 SLC37A4O43826 429 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 KIAA0754O94854 1291 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 IBSPP21815 317 aaPredicted RBP19.79■□□□□ 0.76
RAB40C-203ENST00000535977 HNRNPH3P31942 346 aaKnown RBP19.79■□□□□ 0.76
RAB40C-203ENST00000535977 CCDC122Q5T0U0 273 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 ARHGAP27Q6ZUM4 889 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 KIAA1328Q86T90 577 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 PROM2Q8N271 834 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 RPGRIP1Q96KN7 1286 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 TSG101Q99816 390 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 SLC39A2Q9NP94 309 aa19.79■□□□□ 0.76
RAB40C-203ENST00000535977 KDM3AQ9Y4C1 1321 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 TDP2O95551 362 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 SHMT1P34896 483 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 VWA3BQ502W6 1294 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 NAIF1Q69YI7 327 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-203ENST00000535977 DDX25Q9UHL0 483 aaKnown RBP19.78■□□□□ 0.76
RAB40C-203ENST00000535977 TNNI2P48788 182 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 MAN2A1Q16706 1144 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 HYIQ5T013 277 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 NLGN1Q8N2Q7 840 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 EDEM3Q9BZQ6 932 aa19.78■□□□□ 0.76
RAB40C-203ENST00000535977 NHEJ1Q9H9Q4 299 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-203ENST00000535977 BMP2KQ9NSY1 1161 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-203ENST00000535977 ATXN2Q99700 1313 aaKnown RBP19.77■□□□□ 0.76
RAB40C-203ENST00000535977 RASSF10A6NK89 507 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 EDIL3O43854 480 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 MYBL2P10244 700 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 CERS5Q8N5B7 392 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 SELENOOQ9BVL4 669 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 DHX36Q9H2U1 1008 aaKnown RBP19.77■□□□□ 0.76
RAB40C-203ENST00000535977 PSTPIP2Q9H939 334 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 AGPAT5Q9NUQ2 364 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 GOLGA6BA6NDN3 693 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 G3V3G9 751 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 MEFVO15553 781 aaPredicted RBP19.77■□□□□ 0.76
RAB40C-203ENST00000535977 MARCH6O60337 910 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 MCM3P25205 808 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 HERVK_113P62684 666 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 EHHADHQ08426 723 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 DCAF8Q5TAQ9 597 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 CDC42EP5Q6NZY7 148 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 TRAPPC11Q7Z392 1133 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 JAKMIP2Q96AA8 810 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 NDST4Q9H3R1 872 aa19.77■□□□□ 0.76
RAB40C-203ENST00000535977 BIRC2Q13490 618 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 CCDC96Q2M329 555 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 C11orf91Q3C1V1 193 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 PAPD7Q5XG87 772 aaKnown RBP19.76■□□□□ 0.75
RAB40C-203ENST00000535977 B4GALNT4Q76KP1 1039 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 ANO9A1A5B4 782 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 F8W031 263 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-203ENST00000535977 NDUFAB1O14561 156 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 USP11P51784 963 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 MAP2K1Q02750 393 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-203ENST00000535977 SAMD1Q6SPF0 538 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-203ENST00000535977 DDX12PQ92771 950 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 MKL1Q969V6 931 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 SH3GL2Q99962 352 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 KLC4Q9NSK0 619 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 PCDHA12Q9UN75 941 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 PLAGL2Q9UPG8 496 aa19.76■□□□□ 0.75
RAB40C-203ENST00000535977 KIF3CO14782 793 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 EIF6P56537 245 aaKnown RBP19.75■□□□□ 0.75
RAB40C-203ENST00000535977 FKBP1AP62942 108 aaKnown RBP19.75■□□□□ 0.75
RAB40C-203ENST00000535977 SPA17Q15506 151 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 WLSQ5T9L3 541 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 DCAF4Q8WV16 495 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 SAR1BQ9Y6B6 198 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 PDE6BP35913 854 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 CKAP4Q07065 602 aaKnown RBP19.75■□□□□ 0.75
RAB40C-203ENST00000535977 ACTN3Q08043 901 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-203ENST00000535977 CCDC42Q96M95 316 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 ATF5Q9Y2D1 282 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-203ENST00000535977 POTEMA6NI47 508 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 USO1O60763 962 aaKnown RBP19.75■□□□□ 0.75
RAB40C-203ENST00000535977 APOBEC3HQ6NTF7 200 aaKnown RBP19.75■□□□□ 0.75
RAB40C-203ENST00000535977 MOXD1Q6UVY6 613 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 DYMQ7RTS9 669 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 PODNQ7Z5L7 613 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 ZDHHC15Q96MV8 337 aa19.75■□□□□ 0.75
RAB40C-203ENST00000535977 MMS19Q96T76 1030 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms