RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 BCRP11274 1271 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 SCG2P13521 617 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 TMOD1P28289 359 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 TMED2Q15363 201 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 NME8Q8N427 588 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 CEP70Q8NHQ1 597 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 MYCBPAPQ8TBZ2 947 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 TUBB6Q9BUF5 446 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 ZNF652Q9Y2D9 606 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 DCTN3O75935 186 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 SWT1Q5T5J6 900 aaKnown RBP11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 RPGRQ92834 1020 aaKnown RBP11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 PCDHB13Q9Y5F0 798 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 NBPF26B4DH59 902 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 MAP2K7O14733 419 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 SNUPNO95149 360 aaKnown RBP11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 ZBTB17Q13105 803 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 ADAM9Q13443 819 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 FAM47EQ6ZV65 393 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 NBPF15Q8N660 670 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 ZSCAN10Q96SZ4 725 aaPredicted RBP11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 MAGEF1Q9HAY2 307 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 ADAMTS1Q9UHI8 967 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 RAB21Q9UL25 225 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 GRID2IPA4D2P6 1211 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 OR52Z1P0C646 297 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 KLC1Q07866 573 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 KDM7AQ6ZMT4 941 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 MORC4Q8TE76 937 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
NCAPD3-214ENST00000534548 CCT8L1PA6NM43 557 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 SART1O43290 800 aaKnown RBP11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 GFPT1Q06210 699 aaPredicted RBP11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 PUM3Q15397 648 aaKnown RBP11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 TMEM154Q6P9G4 183 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 CYTH2Q99418 400 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 MLXIPLQ9NP71 852 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 ADD3Q9UEY8 706 aaKnown RBP11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 BCAP29Q9UHQ4 241 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 ABCC12Q96J65 1359 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 FGGP02679 453 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 PDE6AP16499 860 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 TRAPPC10P48553 1259 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 ATG9AQ7Z3C6 839 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 SPATA5Q8NB90 893 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 ARL8AQ96BM9 186 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 MIEF2Q96C03 454 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 SNX24Q9Y343 169 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 TRPC3Q13507 836 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 LRRC14Q15048 493 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 EXOC3L4Q17RC7 722 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 LGSNQ5TDP6 509 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 DDX47Q9H0S4 455 aaKnown RBP11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 CUEDC2Q9H467 287 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 ACSL3O95573 720 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 ANP32DO95626 131 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 ESRRAP11474 423 aaPredicted RBP11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 PRCPP42785 496 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 PMS2P54278 862 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 HAUS3Q68CZ6 603 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 LRIG3Q6UXM1 1119 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 LONP2Q86WA8 852 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 SYNE4Q8N205 404 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 SMC1BQ8NDV3 1235 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 FERMT1Q9BQL6 677 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 CAPN11Q9UMQ6 739 aa11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 G3BP2Q9UN86 482 aaKnown RBP11.1□□□□□ -0.63
NCAPD3-214ENST00000534548 GCNT3O95395 438 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 MYL1P05976 194 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 HNRNPCP07910 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 CTCFP49711 727 aaPredicted RBP11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 KRT26Q7Z3Y9 468 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 PALM2Q8IXS6 379 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 OR2W6PQ8NHA6 318 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 UIMC1Q96RL1 719 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 KCND1Q9NSA2 647 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 PANK4Q9NVE7 773 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 LRRC53A6NM62 1247 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 PHBP35232 272 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 GSTO1P78417 241 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 FOXO4P98177 505 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 SCARF1Q14162 830 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 C10orf76Q5T2E6 689 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.631e-8■□□□□ 11.2
NCAPD3-214ENST00000534548 NAP1L4Q99733 375 aaKnown RBP11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 ITIH6Q6UXX5 1313 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 RNF8O76064 485 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 ECEL1O95672 775 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 GYPCP04921 128 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 SCTRP47872 440 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 RABL6Q3YEC7 729 aaPredicted RBP11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 LIN9Q5TKA1 542 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 TRPM8Q7Z2W7 1104 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 MMGT1Q8N4V1 131 aa11.09□□□□□ -0.63
NCAPD3-214ENST00000534548 BBOF1Q8ND07 529 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms