RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 MPHOSPH6Q99547 160 aaKnown RBP10.81□□□□□ -0.68
VPS26B-207ENST00000532160 BAZ2BQ9UIF8 2168 aaKnown RBP10.81□□□□□ -0.68
VPS26B-207ENST00000532160 ABCB11O95342 1321 aa10.81□□□□□ -0.68
VPS26B-207ENST00000532160 COL4A4P53420 1690 aaPredicted RBP10.8□□□□□ -0.68
VPS26B-207ENST00000532160 B4DLN1 442 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 CYTH3O43739 400 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 ACTN1P12814 892 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 KIF5BP33176 963 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 MRPL12P52815 198 aaKnown RBP10.8□□□□□ -0.68
VPS26B-207ENST00000532160 PTPN11Q06124 597 aaPredicted RBP10.8□□□□□ -0.68
VPS26B-207ENST00000532160 ST3GAL1Q11201 340 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 GPNMBQ14956 572 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 NFKBIBQ15653 356 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 QRICH1Q2TAL8 776 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 GDF6Q6KF10 455 aaPredicted RBP10.8□□□□□ -0.68
VPS26B-207ENST00000532160 TMTC3Q6ZXV5 915 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 HERC6Q8IVU3 1022 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 RETREG2Q8NC44 543 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 DHX38Q92620 1227 aaKnown RBP10.8□□□□□ -0.68
VPS26B-207ENST00000532160 KAT2BQ92831 832 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 ZNF274Q96GC6 653 aaPredicted RBP10.8□□□□□ -0.68
VPS26B-207ENST00000532160 SLC9A7Q96T83 725 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 FTOQ9C0B1 505 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS26B-207ENST00000532160 SLKQ9H2G2 1235 aaPredicted RBP10.8□□□□□ -0.68
VPS26B-207ENST00000532160 RAPGEFL1Q9UHV5 662 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 LIMCH1Q9UPQ0 1083 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 NOD1Q9Y239 953 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 MTCH2Q9Y6C9 303 aa10.8□□□□□ -0.68
VPS26B-207ENST00000532160 PFKFB2O60825 505 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 GH1P01241 217 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 EIF2AK2P19525 551 aaKnown RBP10.79□□□□□ -0.68
VPS26B-207ENST00000532160 TAP1Q03518 808 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 BFSP2Q13515 415 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 GSE1Q14687 1217 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 PTGISQ16647 500 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 TMCO2Q7Z6W1 182 aaPredicted RBP10.79□□□□□ -0.68
VPS26B-207ENST00000532160 CCDC83Q8IWF9 413 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 NSUN6Q8TEA1 469 aaKnown RBP10.79□□□□□ -0.68
VPS26B-207ENST00000532160 PHKBQ93100 1093 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 PIGSQ96S52 555 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 RMDN3Q96TC7 470 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 MAP3K14Q99558 947 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 JMJD4Q9H9V9 463 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 RBM28Q9NW13 759 aaKnown RBP10.79□□□□□ -0.68
VPS26B-207ENST00000532160 CNTNAP5Q8WYK1 1306 aa10.79□□□□□ -0.68
VPS26B-207ENST00000532160 LCHNA4D1U4 455 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 OPLAHO14841 1288 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 ZNF286BP0CG31 522 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 BMP1P13497 986 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 COL9A1P20849 921 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 GNAQP50148 359 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 KCNQ1P51787 676 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 SKIV2LQ15477 1246 aaKnown RBP10.78□□□□□ -0.68
VPS26B-207ENST00000532160 STXBP2Q15833 593 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 NTRK3Q16288 839 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 TCTN1Q2MV58 587 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 ARHGEF16Q5VV41 709 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 SESTD1Q86VW0 696 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 FBXO11Q86XK2 927 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 CAGE1Q8TC20 777 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 PHOSPHO2Q8TCD6 241 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 ARNTL2Q8WYA1 636 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 GTF3C6Q969F1 213 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 TMX3Q96JJ7 454 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 RIOX1Q9H6W3 641 aa10.78□□□□□ -0.68
VPS26B-207ENST00000532160 DDX41Q9UJV9 622 aaKnown RBP10.78□□□□□ -0.68
VPS26B-207ENST00000532160 MRPL11Q9Y3B7 192 aaKnown RBP10.78□□□□□ -0.68
VPS26B-207ENST00000532160 NID2Q14112 1375 aa10.77□□□□□ -0.68
VPS26B-207ENST00000532160 CPLX1O14810 134 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 JAK2O60674 1132 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 LPXNO60711 386 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 PPP1R11O60927 126 aaPredicted RBP10.77□□□□□ -0.69
VPS26B-207ENST00000532160 NBNO60934 754 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 BAIAP3O94812 1187 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 CTDNEP1O95476 244 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 CFBP00751 764 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 POU3F3P20264 500 aaPredicted RBP10.77□□□□□ -0.69
VPS26B-207ENST00000532160 PSEN2P49810 448 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 RCAN1P53805 252 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 WDR5P61964 334 aaKnown RBP10.77□□□□□ -0.69
VPS26B-207ENST00000532160 DEFB103AP81534 67 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 FUT2Q10981 343 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 DGKDQ16760 1214 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 MCF2L2Q86YR7 1114 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 AFAP1L1Q8TED9 768 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 WNT8BQ93098 351 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 SNX21Q969T3 373 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 ZSCAN31Q96LW9 406 aaPredicted RBP10.77□□□□□ -0.69
VPS26B-207ENST00000532160 IWS1Q96ST2 819 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 ALG1Q9BT22 464 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 SLC26A6Q9BXS9 759 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 MAF1Q9H063 256 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
VPS26B-207ENST00000532160 PXMP2Q9NR77 195 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 HDAC6Q9UBN7 1215 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 GTF2IRD1Q9UHL9 959 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 MRVI1Q9Y6F6 885 aa10.77□□□□□ -0.69
VPS26B-207ENST00000532160 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.69
VPS26B-207ENST00000532160 CCDC196A0A1B0GTZ2 297 aa10.76□□□□□ -0.69
VPS26B-207ENST00000532160 KIF28PB7ZC32 967 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms