RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 KPNA6O60684 536 aa21.92■■□□□ 1.1
PKP3-204ENST00000526971 EIF3JO75822 258 aaKnown RBP21.92■■□□□ 1.1
PKP3-204ENST00000526971 KCNQ1P51787 676 aa21.92■■□□□ 1.1
PKP3-204ENST00000526971 TAP1Q03518 808 aa21.92■■□□□ 1.1
PKP3-204ENST00000526971 PTPN11Q06124 597 aaPredicted RBP21.92■■□□□ 1.1
PKP3-204ENST00000526971 GPNMBQ14956 572 aa21.92■■□□□ 1.1
PKP3-204ENST00000526971 BRDTQ58F21 947 aaPredicted RBP21.92■■□□□ 1.1
PKP3-204ENST00000526971 WWC2Q6AWC2 1192 aa21.92■■□□□ 1.1
PKP3-204ENST00000526971 AFG1LQ8WV93 481 aa21.92■■□□□ 1.1
PKP3-204ENST00000526971 ZNF274Q96GC6 653 aaPredicted RBP21.92■■□□□ 1.1
PKP3-204ENST00000526971 MEIS2O14770 477 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 MMP3P08254 477 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 ACTN1P12814 892 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 BMP1P13497 986 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 POU3F3P20264 500 aaPredicted RBP21.91■■□□□ 1.1
PKP3-204ENST00000526971 CHMP4BP1P59074 171 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 ARHGAP1Q07960 439 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 PGM5Q15124 567 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 USP17L6PQ6QN14 398 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 VSIG10LQ86VR7 867 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 HERC6Q8IVU3 1022 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 SMARCC2Q8TAQ2 1214 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 DHX38Q92620 1227 aaKnown RBP21.91■■□□□ 1.1
PKP3-204ENST00000526971 KAT2BQ92831 832 aa21.91■■□□□ 1.1
PKP3-204ENST00000526971 LARP6Q9BRS8 491 aaKnown RBP21.91■■□□□ 1.1
PKP3-204ENST00000526971 MYCLP12524 364 aaPredicted RBP21.9■■□□□ 1.1
PKP3-204ENST00000526971 CCT2P78371 535 aaKnown RBP21.9■■□□□ 1.1
PKP3-204ENST00000526971 NTRK3Q16288 839 aa21.9■■□□□ 1.1
PKP3-204ENST00000526971 LY6KQ17RY6 165 aa21.9■■□□□ 1.1
PKP3-204ENST00000526971 GDF6Q6KF10 455 aaPredicted RBP21.9■■□□□ 1.1
PKP3-204ENST00000526971 SEPT14Q6ZU15 432 aa21.9■■□□□ 1.1
PKP3-204ENST00000526971 RETREG2Q8NC44 543 aa21.9■■□□□ 1.1
PKP3-204ENST00000526971 PHOSPHO2Q8TCD6 241 aa21.9■■□□□ 1.1
PKP3-204ENST00000526971 FTOQ9C0B1 505 aaKnown RBP eCLIP21.9■■□□□ 1.1
PKP3-204ENST00000526971 FRMPD4Q14CM0 1322 aa21.89■■□□□ 1.1
PKP3-204ENST00000526971 hCG_1984214I3L0E3 225 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 PRPF3O43395 683 aaKnown RBP21.89■■□□□ 1.09
PKP3-204ENST00000526971 BFSP2Q13515 415 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 PTGISQ16647 500 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 TCTN1Q2MV58 587 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 TYW1BQ6NUM6 668 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 PPP1R18Q6NYC8 613 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 TMCO2Q7Z6W1 182 aaPredicted RBP21.89■■□□□ 1.09
PKP3-204ENST00000526971 ZNF713Q8N859 430 aaPredicted RBP21.89■■□□□ 1.09
PKP3-204ENST00000526971 IL27Q8NEV9 243 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 IL31RAQ8NI17 732 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 ARNTL2Q8WYA1 636 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 NCOA5Q9HCD5 579 aaKnown RBP21.89■■□□□ 1.09
PKP3-204ENST00000526971 BARHL2Q9NY43 387 aa21.89■■□□□ 1.09
PKP3-204ENST00000526971 SIP14410 1827 aa21.88■■□□□ 1.09
PKP3-204ENST00000526971 LCHNA4D1U4 455 aa21.88■■□□□ 1.09
PKP3-204ENST00000526971 STXBP3O00186 592 aa21.88■■□□□ 1.09
PKP3-204ENST00000526971 IFNAR1P17181 557 aa21.88■■□□□ 1.09
PKP3-204ENST00000526971 CCND2P30279 289 aa21.88■■□□□ 1.09
PKP3-204ENST00000526971 NAPAP54920 295 aa21.88■■□□□ 1.09
PKP3-204ENST00000526971 SKIV2LQ15477 1246 aaKnown RBP21.88■■□□□ 1.09
PKP3-204ENST00000526971 PFKFB3Q16875 520 aaPredicted RBP21.88■■□□□ 1.09
PKP3-204ENST00000526971 SESTD1Q86VW0 696 aa21.88■■□□□ 1.09
PKP3-204ENST00000526971 TSPYL2Q9H2G4 693 aaPredicted RBP21.88■■□□□ 1.09
PKP3-204ENST00000526971 NOD1Q9Y239 953 aa21.88■■□□□ 1.09
PKP3-204ENST00000526971 LPXNO60711 386 aa21.87■■□□□ 1.09
PKP3-204ENST00000526971 GH1P01241 217 aa21.87■■□□□ 1.09
PKP3-204ENST00000526971 SCG2P13521 617 aa21.87■■□□□ 1.09
PKP3-204ENST00000526971 WDR5P61964 334 aaKnown RBP21.87■■□□□ 1.09
PKP3-204ENST00000526971 UBE2SQ16763 222 aa21.87■■□□□ 1.09
PKP3-204ENST00000526971 TEX2Q8IWB9 1127 aa21.87■■□□□ 1.09
PKP3-204ENST00000526971 PHKBQ93100 1093 aa21.87■■□□□ 1.09
PKP3-204ENST00000526971 MICAL3Q7RTP6 2002 aa21.87■■□□□ 1.09
PKP3-204ENST00000526971 BAZ2BQ9UIF8 2168 aaKnown RBP21.87■■□□□ 1.09
PKP3-204ENST00000526971 GTPBP6O43824 516 aaPredicted RBP21.86■■□□□ 1.09
PKP3-204ENST00000526971 RGS20O76081 388 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 BAIAP3O94812 1187 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 DEFB103AP81534 67 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 AKAP17AQ02040 695 aaKnown RBP21.86■■□□□ 1.09
PKP3-204ENST00000526971 GRB10Q13322 594 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 ANKRD1Q15327 319 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 PKN1Q16512 942 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 CAGE1Q8TC20 777 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 AFAP1L1Q8TED9 768 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 RNF26Q9BY78 433 aaPredicted RBP21.86■■□□□ 1.09
PKP3-204ENST00000526971 RIC8AQ9NPQ8 531 aa21.86■■□□□ 1.09
PKP3-204ENST00000526971 DDX41Q9UJV9 622 aaKnown RBP21.86■■□□□ 1.09
PKP3-204ENST00000526971 SMCO2A6NFE2 343 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 NBNO60934 754 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 ADCY7P51828 1080 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 AK2P54819 239 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 MRPS9P82933 396 aaKnown RBP21.85■■□□□ 1.09
PKP3-204ENST00000526971 RBL2Q08999 1139 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 STK3Q13188 491 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 XRRA1Q6P2D8 792 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 LRRC8DQ7L1W4 858 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 WNT8BQ93098 351 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 ZFP91Q96JP5 570 aaPredicted RBP21.85■■□□□ 1.09
PKP3-204ENST00000526971 SLC26A6Q9BXS9 759 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 TPCN1Q9ULQ1 816 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 MRVI1Q9Y6F6 885 aa21.85■■□□□ 1.09
PKP3-204ENST00000526971 DOCK5Q9H7D0 1870 aa21.84■■□□□ 1.09
PKP3-204ENST00000526971 SPDYE3A6NKU9 549 aa21.84■■□□□ 1.09
PKP3-204ENST00000526971 CPLX1O14810 134 aa21.84■■□□□ 1.09
PKP3-204ENST00000526971 PPFIA3O75145 1194 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms