RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 HOMER1Q86YM7 354 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 FMNL3Q8IVF7 1028 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 CPLX3Q8WVH0 158 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 DHRS1Q96LJ7 313 aa6.54□□□□□ -1.36
NPM1-212ENST00000524204 SUPT16HQ9Y5B9 1047 aaKnown RBP6.54□□□□□ -1.36
NPM1-212ENST00000524204 SGSM2O43147 1006 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 B4GALT4O60513 344 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 ABHD18Q0P651 414 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 ODR4Q5SWX8 454 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 SLFN13Q68D06 897 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 KBTBD2Q8IY47 623 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 REXO1Q8N1G1 1221 aaKnown RBP6.53□□□□□ -1.36
NPM1-212ENST00000524204 USP33Q8TEY7 942 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 PMM1Q92871 262 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 DLL4Q9NR61 685 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 UBP1Q9NZI7 540 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 SF3B6Q9Y3B4 125 aaKnown RBP6.53□□□□□ -1.36
NPM1-212ENST00000524204 MRVI1Q9Y6F6 885 aa6.53□□□□□ -1.36
NPM1-212ENST00000524204 CCDC85CA6NKD9 419 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 PRC1O43663 620 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 ZNF202O95125 648 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 FUCA1P04066 466 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 TP53P04637 393 aaPredicted RBP6.52□□□□□ -1.37
NPM1-212ENST00000524204 IL13P35225 146 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 ETFBP38117 255 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 STAT5AP42229 794 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 MLLT6P55198 1093 aaPredicted RBP6.52□□□□□ -1.37
NPM1-212ENST00000524204 AMPD3Q01432 767 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 IFRD2Q12894 506 aaPredicted RBP6.52□□□□□ -1.37
NPM1-212ENST00000524204 LRRFIP1Q32MZ4 808 aaKnown RBP6.52□□□□□ -1.37
NPM1-212ENST00000524204 EEF1DP3Q658K8 133 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 RNF207Q6ZRF8 634 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 SH3TC2Q8TF17 1288 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 ZNF296Q8WUU4 475 aaPredicted RBP6.52□□□□□ -1.37
NPM1-212ENST00000524204 STAG1Q8WVM7 1258 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 TRIM8Q9BZR9 551 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 TCEAL9Q9UHQ7 104 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 EFR3BQ9Y2G0 817 aa6.52□□□□□ -1.37
NPM1-212ENST00000524204 AURKAO14965 403 aa6.51□□□□□ -1.37
NPM1-212ENST00000524204 PLSCR1O15162 318 aa6.51□□□□□ -1.37
NPM1-212ENST00000524204 MCM4P33991 863 aa6.51□□□□□ -1.37
NPM1-212ENST00000524204 GYS2P54840 703 aa6.51□□□□□ -1.37
NPM1-212ENST00000524204 TBX4P57082 545 aa6.51□□□□□ -1.37
NPM1-212ENST00000524204 COL9A2Q14055 689 aaPredicted RBP6.51□□□□□ -1.37
NPM1-212ENST00000524204 PPP2R5DQ14738 602 aa6.51□□□□□ -1.37
NPM1-212ENST00000524204 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
NPM1-212ENST00000524204 PLEKHO2Q8TD55 490 aa6.51□□□□□ -1.37
NPM1-212ENST00000524204 TMEM168Q9H0V1 697 aa6.51□□□□□ -1.37
NPM1-212ENST00000524204 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.51□□□□□ -1.371e-10■□□□□ 9.3
NPM1-212ENST00000524204 STXBP3O00186 592 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 KLF4O43474 513 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 DGCR2P98153 550 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 BIRC2Q13490 618 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 RASA3Q14644 834 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 CR1LQ2VPA4 569 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 NRN1LQ496H8 165 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 DNAJC10Q8IXB1 793 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 AMER2Q8N7J2 671 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 HNRNPLLQ8WVV9 542 aaKnown RBP6.5□□□□□ -1.37
NPM1-212ENST00000524204 NAF1Q96HR8 494 aaKnown RBP6.5□□□□□ -1.37
NPM1-212ENST00000524204 ZFR2Q9UPR6 939 aaKnown RBP6.5□□□□□ -1.37
NPM1-212ENST00000524204 ABCC9O60706 1549 aa6.5□□□□□ -1.37
NPM1-212ENST00000524204 FAM221BA6H8Z2 402 aa6.49□□□□□ -1.37
NPM1-212ENST00000524204 CREB3O43889 395 aa6.49□□□□□ -1.37
NPM1-212ENST00000524204 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
NPM1-212ENST00000524204 ZSWIM3Q96MP5 696 aa6.49□□□□□ -1.37
NPM1-212ENST00000524204 UBA5Q9GZZ9 404 aa6.49□□□□□ -1.37
NPM1-212ENST00000524204 L2HGDHQ9H9P8 463 aa6.49□□□□□ -1.37
NPM1-212ENST00000524204 HOMER2Q9NSB8 354 aa6.49□□□□□ -1.37
NPM1-212ENST00000524204 PRKAG3Q9UGI9 489 aa6.49□□□□□ -1.37
NPM1-212ENST00000524204 ESYT3A0FGR9 886 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 C7orf72A4D263 438 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 FOXS1O43638 330 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 VAMP4O75379 141 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 RALBP1Q15311 655 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 TNNI3KQ59H18 835 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 C16orf86Q6ZW13 317 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 ZC3H18Q86VM9 953 aaKnown RBP6.48□□□□□ -1.37
NPM1-212ENST00000524204 ZCCHC14Q8WYQ9 949 aaKnown RBP6.48□□□□□ -1.37
NPM1-212ENST00000524204 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
NPM1-212ENST00000524204 GNRHR2Q96P88 292 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 DNAJC7Q99615 494 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 GINM1Q9NU53 330 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 ADAMTS1Q9UHI8 967 aa6.48□□□□□ -1.37
NPM1-212ENST00000524204 A0A087X1B8 175 aa6.47□□□□□ -1.37
NPM1-212ENST00000524204 ITGA4P13612 1032 aa6.47□□□□□ -1.37
NPM1-212ENST00000524204 SOX9P48436 509 aa6.47□□□□□ -1.37
NPM1-212ENST00000524204 MASP1P48740 699 aa6.47□□□□□ -1.37
NPM1-212ENST00000524204 OS9Q13438 667 aaPredicted RBP6.47□□□□□ -1.37
NPM1-212ENST00000524204 PRKD1Q15139 912 aaPredicted RBP6.47□□□□□ -1.37
NPM1-212ENST00000524204 USP39Q53GS9 565 aaKnown RBP6.47□□□□□ -1.37
NPM1-212ENST00000524204 APBB1IPQ7Z5R6 666 aaPredicted RBP6.47□□□□□ -1.37
NPM1-212ENST00000524204 KIAA0907Q7Z7F0 614 aaPredicted RBP6.47□□□□□ -1.37
NPM1-212ENST00000524204 FAM126BQ8IXS8 530 aa6.47□□□□□ -1.37
NPM1-212ENST00000524204 DPF3Q92784 378 aa6.47□□□□□ -1.37
NPM1-212ENST00000524204 EXTL1Q92935 676 aa6.47□□□□□ -1.37
NPM1-212ENST00000524204 SGSM3Q96HU1 749 aa6.47□□□□□ -1.37
NPM1-212ENST00000524204 C8orf48Q96LL4 319 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms