RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 THEGQ9P2T0 379 aa13.55□□□□□ -0.24
CTNNA1-237ENST00000523275 SLC12A7Q9Y666 1083 aa13.55□□□□□ -0.24
CTNNA1-237ENST00000523275 C17orf102A2RUQ5 167 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 RFXAPO00287 272 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 EFCAB14O75071 495 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 RXRAP19793 462 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 POU3F3P20264 500 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 SEMA3FQ13275 785 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 TRAF7Q6Q0C0 670 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 NLRX1Q86UT6 975 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 FANCBQ8NB91 859 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 ARNTL2Q8WYA1 636 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 ASB2Q96Q27 587 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 GPR20Q99678 358 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 SENP7Q9BQF6 1050 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 GBF1Q92538 1859 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 MYH7BA7E2Y1 1941 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 TRIP12Q14669 1992 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 TET1Q8NFU7 2136 aa13.54□□□□□ -0.24
CTNNA1-237ENST00000523275 RSPH10B2B2RC85 870 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 GTPBP6O43824 516 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 LGR5O75473 907 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 ARHGEF15O94989 841 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 RSPH10BP0C881 870 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 HOXC8P31273 242 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 THPOP40225 353 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 DEFB103AP81534 67 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 MRPS5P82675 430 aaKnown RBP13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 MBTPS1Q14703 1052 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 TCTN1Q2MV58 587 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 RNF20Q5VTR2 975 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 TMCO2Q7Z6W1 182 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 GIMAP8Q8ND71 665 aaPredicted RBP13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 LRRC2Q9BYS8 371 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 EMSYQ7Z589 1322 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 PRUNE2Q8WUY3 3088 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 TANC1Q9C0D5 1861 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 EYSQ5T1H1 3165 aa13.53□□□□□ -0.24
CTNNA1-237ENST00000523275 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 EPOPA6NHQ4 379 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 GJB5O95377 273 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 GNAT1P11488 350 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 SYNE3Q6ZMZ3 975 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 TMTC3Q6ZXV5 915 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 CENPQQ7L2Z9 268 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 SGMS1Q86VZ5 419 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 RAD9AQ99638 391 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 SETD4Q9NVD3 440 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 MTCH2Q9Y6C9 303 aa13.52□□□□□ -0.25
CTNNA1-237ENST00000523275 LCHNA4D1U4 455 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 TREHO43280 583 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 SP4Q02446 784 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 UTP14CQ5TAP6 766 aaKnown RBP13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 MICU3Q86XE3 530 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 GPRASP2Q96D09 838 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 CDHR1Q96JP9 859 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 NEK1Q96PY6 1258 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 ZNF215Q9UL58 517 aaPredicted RBP13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 TELO2Q9Y4R8 837 aa13.51□□□□□ -0.25
CTNNA1-237ENST00000523275 SPDYE3A6NKU9 549 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 ATP9AO75110 1047 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 CAND2O75155 1236 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 ITGB5P18084 799 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 GRB10Q13322 594 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 SKIV2LQ15477 1246 aaKnown RBP13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 HEATR3Q7Z4Q2 680 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 SKAP1Q86WV1 359 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 TRIM50Q86XT4 487 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 IL27Q8NEV9 243 aa13.5□□□□□ -0.25
CTNNA1-237ENST00000523275 TNFRSF10AO00220 468 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 MAFGO15525 162 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 AMHP03971 560 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 KCNA2P16389 499 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 TCF7P36402 384 aaPredicted RBP13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 ARHGAP4P98171 946 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 EXOSC10Q01780 885 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 UBE2SQ16763 222 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 AAK1Q2M2I8 961 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 KRT40Q6A162 431 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 FAM117BQ6P1L5 589 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 APOA5Q6Q788 366 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 DHX32Q7L7V1 743 aaKnown RBP13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 SPRED2Q7Z698 418 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 ADAMTS19Q8TE59 1207 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 LMBR1Q8WVP7 490 aa13.49□□□□□ -0.25
CTNNA1-237ENST00000523275 SEPT8Q92599 483 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms