RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 DOCK1Q14185 1865 aa28.77■■■□□ 2.2
COL13A1-214ENST00000522165 FRMD3A2A2Y4 597 aa28.77■■■□□ 2.2
COL13A1-214ENST00000522165 B4DLN1 442 aa28.77■■■□□ 2.2
COL13A1-214ENST00000522165 PES1O00541 588 aaKnown RBP28.77■■■□□ 2.2
COL13A1-214ENST00000522165 VCAM1P19320 739 aa28.77■■■□□ 2.2
COL13A1-214ENST00000522165 MTIF2P46199 727 aaKnown RBP28.77■■■□□ 2.2
COL13A1-214ENST00000522165 SYT2Q8N9I0 419 aaPredicted RBP28.77■■■□□ 2.2
COL13A1-214ENST00000522165 SOWAHDA6NJG2 315 aa28.76■■■□□ 2.19
COL13A1-214ENST00000522165 RNF225M0QZC1 329 aaPredicted RBP28.76■■■□□ 2.19
COL13A1-214ENST00000522165 USP14P54578 494 aa28.76■■■□□ 2.19
COL13A1-214ENST00000522165 LRCH2Q5VUJ6 765 aa28.76■■■□□ 2.19
COL13A1-214ENST00000522165 SCYL3Q8IZE3 742 aa28.76■■■□□ 2.19
COL13A1-214ENST00000522165 PABPC4Q13310 644 aaKnown RBP eCLIP28.76■■■□□ 2.19
COL13A1-214ENST00000522165 PPP2R5CQ13362 524 aa28.76■■■□□ 2.19
COL13A1-214ENST00000522165 TRPM4Q8TD43 1214 aa28.76■■■□□ 2.19
COL13A1-214ENST00000522165 PPP1R9AQ9ULJ8 1098 aa28.76■■■□□ 2.19
COL13A1-214ENST00000522165 NFIBO00712 420 aa28.75■■■□□ 2.19
COL13A1-214ENST00000522165 FLOT1O75955 427 aa28.75■■■□□ 2.19
COL13A1-214ENST00000522165 FGFR1OPO95684 399 aaKnown RBP28.75■■■□□ 2.19
COL13A1-214ENST00000522165 CACNB1Q02641 598 aaPredicted RBP28.75■■■□□ 2.19
COL13A1-214ENST00000522165 GHRHRQ02643 423 aa28.75■■■□□ 2.19
COL13A1-214ENST00000522165 MIIPQ5JXC2 388 aa28.75■■■□□ 2.19
COL13A1-214ENST00000522165 KCTD17Q8N5Z5 321 aa28.75■■■□□ 2.19
COL13A1-214ENST00000522165 ABHD10Q9NUJ1 306 aa28.75■■■□□ 2.19
COL13A1-214ENST00000522165 GPRC5DQ9NZD1 345 aa28.75■■■□□ 2.19
COL13A1-214ENST00000522165 RABGAP1Q9Y3P9 1069 aa28.75■■■□□ 2.19
COL13A1-214ENST00000522165 KRT18P05783 430 aaKnown RBP28.74■■■□□ 2.19
COL13A1-214ENST00000522165 SETQ01105 290 aaPredicted RBP28.74■■■□□ 2.19
COL13A1-214ENST00000522165 CYP4A11Q02928 519 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 MTF1Q14872 753 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 HERC4Q5GLZ8 1057 aaPredicted RBP28.74■■■□□ 2.19
COL13A1-214ENST00000522165 MCF2L2Q86YR7 1114 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 TSG101Q99816 390 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 HSD17B14Q9BPX1 270 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 NOC4LQ9BVI4 516 aaKnown RBP28.74■■■□□ 2.19
COL13A1-214ENST00000522165 FGFBP2Q9BYJ0 223 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 RPTORQ8N122 1335 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 SPP2Q13103 211 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 ZCWPW2Q504Y3 356 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 RAD9BQ6WBX8 426 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 LRRC55Q6ZSA7 311 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 CPXCR1Q8N123 301 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 RPAP3Q9H6T3 665 aaPredicted RBP28.74■■■□□ 2.19
COL13A1-214ENST00000522165 RAVER2Q9HCJ3 691 aaKnown RBP28.74■■■□□ 2.19
COL13A1-214ENST00000522165 TBC1D7Q9P0N9 293 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 COL20A1Q9P218 1284 aa28.74■■■□□ 2.19
COL13A1-214ENST00000522165 GOLGA6L9A6NEM1 432 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 ETF1P62495 437 aaKnown RBP28.73■■■□□ 2.19
COL13A1-214ENST00000522165 RAD51AP2Q09MP3 1159 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 GIT2Q14161 759 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 PRAMEF18Q5VWM3 479 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 TRIM65Q6PJ69 517 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 SLC30A10Q6XR72 485 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 SYT10Q6XYQ8 523 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 TUFT1Q9NNX1 390 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 RGL1Q9NZL6 768 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 ALAS1P13196 640 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 KRT9P35527 623 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 BACE1P56817 501 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 TBC1D8BQ0IIM8 1120 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 ZKSCAN4Q969J2 545 aaPredicted RBP28.73■■■□□ 2.19
COL13A1-214ENST00000522165 WRNIP1Q96S55 665 aa28.73■■■□□ 2.19
COL13A1-214ENST00000522165 NKRFO15226 690 aaKnown RBP eCLIP28.72■■■□□ 2.19
COL13A1-214ENST00000522165 GAS7O60861 476 aa28.72■■■□□ 2.19
COL13A1-214ENST00000522165 EYA4O95677 639 aa28.72■■■□□ 2.19
COL13A1-214ENST00000522165 ARP10275 920 aa28.72■■■□□ 2.19
COL13A1-214ENST00000522165 ZFP91Q96JP5 570 aaPredicted RBP28.72■■■□□ 2.19
COL13A1-214ENST00000522165 MXRA8Q9BRK3 442 aa28.72■■■□□ 2.19
COL13A1-214ENST00000522165 ZNF577Q9BSK1 485 aa28.72■■■□□ 2.19
COL13A1-214ENST00000522165 DESI2Q9BSY9 194 aa28.72■■■□□ 2.19
COL13A1-214ENST00000522165 TTC26A0AVF1 554 aa28.71■■■□□ 2.19
COL13A1-214ENST00000522165 CTIFO43310 598 aaKnown RBP28.71■■■□□ 2.19
COL13A1-214ENST00000522165 PTPRAP18433 802 aa28.71■■■□□ 2.19
COL13A1-214ENST00000522165 TMTC1Q8IUR5 882 aa28.71■■■□□ 2.19
COL13A1-214ENST00000522165 GPC2Q8N158 579 aa28.71■■■□□ 2.19
COL13A1-214ENST00000522165 AS3MTQ9HBK9 375 aa28.71■■■□□ 2.19
COL13A1-214ENST00000522165 ZNF280CQ8ND82 737 aa28.71■■■□□ 2.19
COL13A1-214ENST00000522165 PICK1Q9NRD5 415 aa28.71■■■□□ 2.19
COL13A1-214ENST00000522165 CAPN11Q9UMQ6 739 aa28.71■■■□□ 2.19
COL13A1-214ENST00000522165 SLITRK3O94933 977 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 MUM1L1Q5H9M0 696 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 ARHGAP27Q6ZUM4 889 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 SCFD1Q8WVM8 642 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 TSC1Q92574 1164 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 UPF1Q92900 1129 aaKnown RBP eCLIP28.7■■■□□ 2.19
COL13A1-214ENST00000522165 ERGIC2Q96RQ1 377 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 REEP2Q9BRK0 252 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 WDR11Q9BZH6 1224 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 BHMT2Q9H2M3 363 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 GGA3Q9NZ52 723 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 ADGRG1Q9Y653 693 aa28.7■■■□□ 2.19
COL13A1-214ENST00000522165 RBBP6Q7Z6E9 1792 aaKnown RBP28.7■■■□□ 2.18
COL13A1-214ENST00000522165 CHMP2AO43633 222 aa28.7■■■□□ 2.18
COL13A1-214ENST00000522165 CCDC175P0C221 793 aa28.7■■■□□ 2.18
COL13A1-214ENST00000522165 LMNB1P20700 586 aa28.7■■■□□ 2.18
COL13A1-214ENST00000522165 ERVK-24P63145 666 aa28.7■■■□□ 2.18
COL13A1-214ENST00000522165 CTTNQ14247 550 aaKnown RBP28.7■■■□□ 2.18
COL13A1-214ENST00000522165 KRT26Q7Z3Y9 468 aa28.7■■■□□ 2.18
COL13A1-214ENST00000522165 DYDC2Q96IM9 177 aa28.7■■■□□ 2.18
COL13A1-214ENST00000522165 MAP3K20Q9NYL2 800 aaKnown RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms