RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 NDUFB10O96000 172 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 AMHP03971 560 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 MYL3P08590 195 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 BRD2P25440 801 aaKnown RBP5.82□□□□□ -1.48
SDCBP-207ENST00000520168 NBL1P41271 181 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 STAT2P52630 851 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 MRPL12P52815 198 aaKnown RBP5.82□□□□□ -1.48
SDCBP-207ENST00000520168 SH3BP2P78314 561 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 DEFB103AP81534 67 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 HTRA4P83105 476 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-207ENST00000520168 ZXDAP98168 799 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 CNTN2Q02246 1040 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 KLRC3Q07444 240 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 PTGISQ16647 500 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 EPC2Q52LR7 807 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 EP400NLQ6ZTU2 488 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 LRRC8DQ7L1W4 858 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 SPRED2Q7Z698 418 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 RPAINQ86UA6 219 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 FAM160B2Q86V87 743 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 FBXO16Q8IX29 292 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-207ENST00000520168 GMCL1P1Q8NEA9 526 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 OR6J1Q8NGC5 347 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 SSH3Q8TE77 659 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 CHURC1Q8WUH1 139 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 PPP2R3CQ969Q6 453 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 MKL1Q969V6 931 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 DYNLL2Q96FJ2 89 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 C17orf80Q9BSJ5 609 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 WDR11Q9BZH6 1224 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 KDM4CQ9H3R0 1056 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 HOMER2Q9NSB8 354 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 RNF146Q9NTX7 359 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 FAM217BQ9NTX9 383 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-207ENST00000520168 ARPP21Q9UBL0 812 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-207ENST00000520168 FAM186AA6NE01 2351 aa5.82□□□□□ -1.48
SDCBP-207ENST00000520168 KIAA1671Q9BY89 1806 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 ZBED9Q6R2W3 1325 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 ZNF532Q9HCE3 1301 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 TCRBV5S4A2TA0A5A2 114 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 FSD2A1L4K1 749 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 PRR23AA6NEV1 266 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 H3BM21 787 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 IPO8O15397 1037 aaKnown RBP5.81□□□□□ -1.48
SDCBP-207ENST00000520168 PLA2G6O60733 806 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 SURF6O75683 361 aaKnown RBP5.81□□□□□ -1.48
SDCBP-207ENST00000520168 EYA4O95677 639 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 RB1P06400 928 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 CCNYL3P0C7X3 344 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 MS4A1P11836 297 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 PDE4DQ08499 809 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 GPM6BQ13491 265 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 CBX2Q14781 532 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-207ENST00000520168 PPP2R5BQ15173 497 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 TCEAL5Q5H9L2 206 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 FBXO11Q86XK2 927 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 ERC1Q8IUD2 1116 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 LRRC47Q8N1G4 583 aaKnown RBP5.81□□□□□ -1.48
SDCBP-207ENST00000520168 LCORLQ8N3X6 602 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 SCFD2Q8WU76 684 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 ANKS1AQ92625 1134 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 TRERF1Q96PN7 1200 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 NUP88Q99567 741 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-207ENST00000520168 FSD1Q9BTV5 496 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 C11orf84Q9BUA3 381 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-207ENST00000520168 KATNAL1Q9BW62 490 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.81□□□□□ -1.48
SDCBP-207ENST00000520168 ANTXR1Q9H6X2 564 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 PDGFCQ9NRA1 345 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 CYP39A1Q9NYL5 469 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 CD207Q9UJ71 328 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 PNMA2Q9UL42 364 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 NOP58Q9Y2X3 529 aaKnown RBP5.81□□□□□ -1.48
SDCBP-207ENST00000520168 MYH6P13533 1939 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 CACNA1BQ00975 2339 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 CFAP47Q6ZTR5 3102 aa5.81□□□□□ -1.48
SDCBP-207ENST00000520168 PLIN4Q96Q06 1357 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 RIF1Q5UIP0 2472 aaKnown RBP5.8□□□□□ -1.48
SDCBP-207ENST00000520168 LOC730098B7Z3J9 87 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 C5orf67F2Z3F1 127 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 NBNO60934 754 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 LGR5O75473 907 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 TTLL1O95922 423 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 CYP2D6P10635 497 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 CKBP12277 381 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 BMP3P12645 472 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 LORP23490 312 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-207ENST00000520168 AVPR2P30518 371 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 LTBRP36941 435 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 ALDH5A1P51649 535 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-207ENST00000520168 SLFN5Q08AF3 891 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 PTK7Q13308 1070 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 PTPRNQ16849 979 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 GIMAP6Q6P9H5 292 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 EEPD1Q7L9B9 569 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 TMEM192Q8IY95 271 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 MYOCDQ8IZQ8 938 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 NKD2Q969F2 451 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-207ENST00000520168 EAF2Q96CJ1 260 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-207ENST00000520168 YME1L1Q96TA2 773 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms