RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 BRWD1Q9NSI6 2320 aa6.98□□□□□ -1.29
LINCR-0001-202ENST00000518098 H3BRB1 525 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 NOP56O00567 594 aaKnown RBP6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 RANBP6O60518 1105 aaKnown RBP6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 PRDM1O75626 825 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 HOXC8P31273 242 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 RRP1P56182 461 aaKnown RBP6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 ITIH3Q06033 890 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 NEDD9Q14511 834 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 TPRNQ4KMQ1 711 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 CES5AQ6NT32 575 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 ZC3H14Q6PJT7 736 aaKnown RBP6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 TRAF7Q6Q0C0 670 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 TMEM184AQ6ZMB5 413 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 SEPT14Q6ZU15 432 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 SPRED2Q7Z698 418 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 TMCO2Q7Z6W1 182 aaPredicted RBP6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 RASGRP4Q8TDF6 673 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 CLEC4DQ8WXI8 215 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 GBF1Q92538 1859 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 ASIC4Q96FT7 647 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 SPATA33Q96N06 139 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 CTAGE1Q96RT6 745 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 PHOX2BQ99453 314 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 RTP3Q9BQQ7 232 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 ALG1Q9BT22 464 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 MFSD1Q9H3U5 465 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 RNF41Q9H4P4 317 aaPredicted RBP6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 IGFLR1Q9H665 355 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 TUT1Q9H6E5 874 aaKnown RBP6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 C1orf115Q9H7X2 142 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 TLE6Q9H808 572 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 MLXIPQ9HAP2 919 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 PLAGL2Q9UPG8 496 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 CCDC171Q6TFL3 1326 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 NRCAMQ92823 1304 aa6.97□□□□□ -1.29
LINCR-0001-202ENST00000518098 TANC1Q9C0D5 1861 aa6.96□□□□□ -1.29
LINCR-0001-202ENST00000518098 H0Y858 1186 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 FGRP09769 529 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 ZNF543Q08ER8 600 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 MBTPS1Q14703 1052 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 LY6KQ17RY6 165 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 CELF3Q5SZQ8 465 aaKnown RBP6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 TMEM63BQ5T3F8 832 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 MYSM1Q5VVJ2 828 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 ASTLQ6HA08 431 aaPredicted RBP6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 SLC30A10Q6XR72 485 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 CHST3Q7LGC8 479 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 DGLUCYQ7Z3D6 616 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 ADSSL1Q8N142 457 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 OSBP2Q969R2 916 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 ZNF689Q96CS4 500 aaPredicted RBP6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 NGRNQ9NPE2 291 aaKnown RBP6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 TLR9Q9NR96 1032 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 STK39Q9UEW8 545 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 LZTS1Q9Y250 596 aa6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 USP15Q9Y4E8 981 aaPredicted RBP6.96□□□□□ -1.3
LINCR-0001-202ENST00000518098 RIF1Q5UIP0 2472 aaKnown RBP6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 M0QZ92 97 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 GRM6O15303 877 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 TBX10O75333 385 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 DGKIO75912 1065 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 ARIH2O95376 493 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 NR3C2P08235 984 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 SNHG28P0DPA3 235 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 MFAP1P55081 439 aaKnown RBP6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 GHRHRQ02643 423 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 NONOQ15233 471 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 ALX1Q15699 326 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 CLUL1Q15846 466 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 ASPRV1Q53RT3 343 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 IER5Q5VY09 327 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 XRRA1Q6P2D8 792 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 ASCL5Q7RTU5 278 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 DGKHQ86XP1 1220 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 NPAS4Q8IUM7 802 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 STK11IPQ8N1F8 1099 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 SYTL5Q8TDW5 730 aaPredicted RBP6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 MICAL1Q8TDZ2 1067 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 SUSD6Q92537 303 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 COPS5Q92905 334 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 CDHR1Q96JP9 859 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 RPGRIP1Q96KN7 1286 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 EPB41L4AQ9HCS5 686 aaPredicted RBP6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 INCENPQ9NQS7 918 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 CLEC1BQ9P126 229 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 USTQ9Y2C2 406 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 WDR87Q6ZQQ6 2873 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 ZNF292O60281 2723 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 MYH8P13535 1937 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 GREB1LQ9C091 1923 aaPredicted RBP6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 TTC41PQ6P2S7 1318 aa6.95□□□□□ -1.3
LINCR-0001-202ENST00000518098 SIP14410 1827 aa6.94□□□□□ -1.3
LINCR-0001-202ENST00000518098 COL4A4P53420 1690 aaPredicted RBP6.94□□□□□ -1.3
LINCR-0001-202ENST00000518098 MYO15AQ9UKN7 3530 aa6.94□□□□□ -1.3
LINCR-0001-202ENST00000518098 ENPP3O14638 875 aa6.94□□□□□ -1.3
LINCR-0001-202ENST00000518098 HOXA2O43364 376 aa6.94□□□□□ -1.3
LINCR-0001-202ENST00000518098 LMNAP02545 664 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms