RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 DDX19AQ9NUU7 478 aaKnown RBP5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 RAB21Q9UL25 225 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 PPP1R9AQ9ULJ8 1098 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 TMEM98Q9Y2Y6 226 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 PCDHGC5Q9Y5F6 944 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 MRFAP1Q9Y605 127 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 EVC2Q86UK5 1308 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 RTL1A6NKG5 1358 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 ATP10AO60312 1499 aa5.36□□□□□ -1.55
HMGB1P19-201ENST00000517578 CFAP43Q8NDM7 1665 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 MROH2BQ7Z745 1585 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 ANKRD30BQ9BXX2 1392 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 SYNGAP1Q96PV0 1343 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 CCDC162PA2VCL2 907 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 BUB1BO60566 1050 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 URI1O94763 535 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 VIMP08670 466 aaKnown RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 JUNBP17275 347 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 XBP1P17861 261 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 FNTAP49354 379 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 GNAI1P63096 354 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 ACTN3Q08043 901 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 MPP3Q13368 585 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 RIPK1Q13546 671 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 CLPPQ16740 277 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 INF2Q27J81 1249 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 FBXW10Q5XX13 1052 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 ALG1LQ6GMV1 187 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 OGFOD3Q6PK18 319 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZNF574Q6ZN55 896 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 RSRC2Q7L4I2 434 aaKnown RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 CHD1LQ86WJ1 897 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 POU5F2Q8N7G0 328 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 DDX54Q8TDD1 881 aaKnown RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 BCL7CQ8WUZ0 217 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 RSPH1Q8WYR4 309 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 WDR89Q96FK6 387 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 CDK5RAP3Q96JB5 506 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 MAML3Q96JK9 1138 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 GDAP1L1Q96MZ0 367 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 TTC14Q96N46 770 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 SH3GL1Q99961 368 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 EIF2AQ9BY44 585 aaKnown RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 LRRCC1Q9C099 1032 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 OSBPL5Q9H0X9 879 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 NUP62CLQ9H1M0 184 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 RETREG1Q9H6L5 497 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZWILCHQ9H900 591 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 PDE11AQ9HCR9 933 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 GPN3Q9UHW5 284 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 L1RE1Q9UN81 338 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 ATP6V0A2Q9Y487 856 aa5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 ARID1BQ8NFD5 2236 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P19-201ENST00000517578 E9PCH4 1651 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 WIZO95785 1651 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 KDM5DQ9BY66 1539 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 UHRF1BP1Q6BDS2 1440 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 FGD6Q6ZV73 1430 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 CADPSQ9ULU8 1353 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 BICDL2A1A5D9 508 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 CCDC69A6NI79 296 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 BECN2A8MW95 431 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 GOLGA8KD6RF30 607 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 TMPRSS2O15393 492 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 TIMM44O43615 452 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 MYO1BO43795 1136 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 MGRN1O60291 552 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 BCAR3O75815 825 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 RNF8O76064 485 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 PAPLNO95428 1278 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 PYGLP06737 847 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 LDHBP07195 334 aaKnown RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 C8AP07357 584 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 GSTA2P09210 222 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 CYP11B2P19099 503 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 SFPQP23246 707 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 RPL13P26373 211 aaKnown RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 PSMC4P43686 418 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 CCT5P48643 541 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 AMPHP49418 695 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 MRPS35P82673 323 aaKnown RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 ZBED6P86452 979 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 HDLBPQ00341 1268 aaKnown RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 PTPN12Q05209 780 aaKnown RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 FAAP100Q0VG06 881 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 EIF2B5Q13144 721 aaKnown RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 SEPT2Q15019 361 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 CNGA3Q16281 694 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 PARP10Q53GL7 1025 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 BEND6Q5SZJ8 279 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 CCDC70Q6NSX1 233 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 CCDC121Q6ZUS5 278 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 SPRED2Q7Z698 418 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 LMNTD2Q8IXW0 634 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 ELOA2Q8IYF1 753 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 LRRC43Q8N309 656 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 MSANTD4Q8NCY6 345 aa5.34□□□□□ -1.55
HMGB1P19-201ENST00000517578 PHC3Q8NDX5 983 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms