RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 PCDHA13Q9Y5I0 950 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 A0A1W2PQ27 194 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 A0A1W2PQ64 194 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 A0A1W2PQD8 194 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 LAD1O00515 517 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 APOEP02649 317 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 PTPREP23469 700 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 EIF4A3P38919 411 aaKnown RBP18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 THOC5Q13769 683 aaKnown RBP18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 CEP170P1Q96L14 293 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 LUC7L3O95232 432 aaKnown RBP18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 MTERF2Q49AM1 385 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 HSPH1Q92598 858 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 RRP15Q9Y3B9 282 aaKnown RBP18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 GAP43P17677 238 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 NCF2P19878 526 aaPredicted RBP18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 KCTD2Q14681 263 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 MORC4Q8TE76 937 aa18.78■□□□□ 0.6
ARHGEF28-212ENST00000513042 PGRMC1O00264 195 aaKnown RBP18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 MAN2A1Q16706 1144 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 OR6B2Q6IFH4 312 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 CDC26Q8NHZ8 85 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 PTPRTO14522 1441 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 EIF3CLB5ME19 914 aaKnown RBP18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 EIF3CQ99613 913 aaKnown RBP18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 ZWILCHQ9H900 591 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 METTL23Q86XA0 190 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 PUS7LQ9H0K6 701 aaKnown RBP18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 FOSP01100 380 aaPredicted RBP18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 MMP1P03956 469 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 NNTQ13423 1086 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 DNAJC24Q6P3W2 148 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 USP17L2Q6R6M4 530 aa18.77■□□□□ 0.6
ARHGEF28-212ENST00000513042 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.59
ARHGEF28-212ENST00000513042 LRRD1A4D1F6 860 aa18.77■□□□□ 0.59
ARHGEF28-212ENST00000513042 KCNQ4P56696 695 aa18.77■□□□□ 0.59
ARHGEF28-212ENST00000513042 EXT2Q93063 718 aa18.77■□□□□ 0.59
ARHGEF28-212ENST00000513042 NBPF3Q9H094 633 aa18.77■□□□□ 0.59
ARHGEF28-212ENST00000513042 SLAIN2Q9P270 581 aa18.77■□□□□ 0.59
ARHGEF28-212ENST00000513042 CDR2Q01850 454 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 C10orf76Q5T2E6 689 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 ABI1Q8IZP0 508 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 ASAP1Q9ULH1 1129 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 XDHP47989 1333 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 NPC1L1Q9UHC9 1359 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 CFLARO15519 480 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 ATP6V0A1Q93050 837 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 THOC1Q96FV9 657 aaKnown RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 KIF23Q02241 960 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 SPOPLQ6IQ16 392 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 RSBN1LQ6PCB5 846 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 TRIM11Q96F44 468 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 NOVA2Q9UNW9 492 aaKnown RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 USP17L8P0C7I0 530 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 PDCD7Q8N8D1 485 aaKnown RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 RNF217Q8TC41 542 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 ALKBH8Q96BT7 664 aaKnown RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 CUEDC2Q9H467 287 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 PCDHB6Q9Y5E3 794 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 MT-ND3P03897 115 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 MARK3P27448 753 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 CTTNQ14247 550 aaKnown RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 CDO1Q16878 200 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 CACTINQ8WUQ7 758 aaKnown RBP18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 SLC7A3Q8WY07 619 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 FGD4Q96M96 766 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 STK17AQ9UEE5 414 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 RWDD2AQ9UIY3 292 aa18.76■□□□□ 0.59
ARHGEF28-212ENST00000513042 PPFIA2O75334 1257 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 HEXIM2Q96MH2 286 aaKnown RBP18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 RNF26Q9BY78 433 aaPredicted RBP18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 POLR3EQ9NVU0 708 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 PHLPP2Q6ZVD8 1323 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 HOXA13P31271 388 aaPredicted RBP18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 ZBTB41Q5SVQ8 909 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 RETREG2Q8NC44 543 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 PIP4K2CQ8TBX8 421 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 EPS15L1Q9UBC2 864 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 CTNND1O60716 968 aaKnown RBP18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 ADD2P35612 726 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 MAML1Q92585 1016 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 KRT82Q9NSB4 513 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 PLCG1P19174 1290 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 RNASELQ05823 741 aaKnown RBP18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 DPY19L2Q6NUT2 758 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 MIGA2Q7L4E1 593 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 IRAK4Q9NWZ3 460 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 LRFN2Q9ULH4 789 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 ORC6Q9Y5N6 252 aa18.75■□□□□ 0.59
ARHGEF28-212ENST00000513042 USP17L3A6NCW0 530 aa18.74■□□□□ 0.59
ARHGEF28-212ENST00000513042 USP17L4A6NCW7 530 aa18.74■□□□□ 0.59
ARHGEF28-212ENST00000513042 LARGE1O95461 756 aa18.74■□□□□ 0.59
ARHGEF28-212ENST00000513042 ZNF449Q6P9G9 518 aa18.74■□□□□ 0.59
ARHGEF28-212ENST00000513042 USP17L1Q7RTZ2 530 aa18.74■□□□□ 0.59
ARHGEF28-212ENST00000513042 PAGE5Q96GU1 130 aa18.74■□□□□ 0.59
ARHGEF28-212ENST00000513042 GPR101Q96P66 508 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms