RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 RTEL1Q9NZ71 1219 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 THEGQ9P2T0 379 aa22.98■■□□□ 1.27
UBE2D3-220ENST00000505307 TLL1O43897 1013 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 GNAT1P11488 350 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 HOXC8P31273 242 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 IKBKEQ14164 716 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 ZNF618Q5T7W0 954 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 CYFIP1Q7L576 1253 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 TEX2Q8IWB9 1127 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 FANCBQ8NB91 859 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 ATP6V0A1Q93050 837 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 PRDM6Q9NQX0 595 aa22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 ZNF215Q9UL58 517 aaPredicted RBP22.97■■□□□ 1.27
UBE2D3-220ENST00000505307 GTPBP6O43824 516 aaPredicted RBP22.96■■□□□ 1.27
UBE2D3-220ENST00000505307 CAND2O75155 1236 aa22.96■■□□□ 1.27
UBE2D3-220ENST00000505307 ZNF200P98182 395 aaPredicted RBP22.96■■□□□ 1.27
UBE2D3-220ENST00000505307 TAP1Q03518 808 aa22.96■■□□□ 1.27
UBE2D3-220ENST00000505307 SEMA3FQ13275 785 aa22.96■■□□□ 1.27
UBE2D3-220ENST00000505307 TRAF7Q6Q0C0 670 aa22.96■■□□□ 1.27
UBE2D3-220ENST00000505307 GPRASP2Q96D09 838 aa22.96■■□□□ 1.27
UBE2D3-220ENST00000505307 GPR20Q99678 358 aa22.96■■□□□ 1.27
UBE2D3-220ENST00000505307 CHD7Q9P2D1 2997 aa22.95■■□□□ 1.27
UBE2D3-220ENST00000505307 RSPH10B2B2RC85 870 aa22.95■■□□□ 1.26
UBE2D3-220ENST00000505307 RSPH10BP0C881 870 aa22.95■■□□□ 1.26
UBE2D3-220ENST00000505307 SMIM10L2AP0DMW4 78 aa22.95■■□□□ 1.26
UBE2D3-220ENST00000505307 SMIM10L2BP0DMW5 78 aa22.95■■□□□ 1.26
UBE2D3-220ENST00000505307 CCDC85BQ15834 202 aaPredicted RBP22.95■■□□□ 1.26
UBE2D3-220ENST00000505307 TMTC3Q6ZXV5 915 aa22.95■■□□□ 1.26
UBE2D3-220ENST00000505307 ZBED2Q9BTP6 218 aa22.95■■□□□ 1.26
UBE2D3-220ENST00000505307 SPTBN5Q9NRC6 3674 aaKnown RBP22.95■■□□□ 1.26
UBE2D3-220ENST00000505307 LGR5O75473 907 aa22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 RXRAP19793 462 aa22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 THPOP40225 353 aa22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 MRPS5P82675 430 aaKnown RBP22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 HIC1Q14526 733 aa22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 WNT8BQ93098 351 aa22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 NEK1Q96PY6 1258 aa22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 RNPEPQ9H4A4 650 aa22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 BCAS3Q9H6U6 928 aa22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 RBM28Q9NW13 759 aaKnown RBP22.94■■□□□ 1.26
UBE2D3-220ENST00000505307 SPDYE3A6NKU9 549 aa22.93■■□□□ 1.26
UBE2D3-220ENST00000505307 MAFGO15525 162 aa22.93■■□□□ 1.26
UBE2D3-220ENST00000505307 TSGA10IPQ3SY00 556 aa22.93■■□□□ 1.26
UBE2D3-220ENST00000505307 CMTR1Q8N1G2 835 aaKnown RBP22.93■■□□□ 1.26
UBE2D3-220ENST00000505307 ASB2Q96Q27 587 aa22.93■■□□□ 1.26
UBE2D3-220ENST00000505307 RAD9AQ99638 391 aa22.93■■□□□ 1.26
UBE2D3-220ENST00000505307 EHMT1Q9H9B1 1298 aa22.93■■□□□ 1.26
UBE2D3-220ENST00000505307 TTC28Q96AY4 2481 aa22.93■■□□□ 1.26
UBE2D3-220ENST00000505307 GJB5O95377 273 aa22.92■■□□□ 1.26
UBE2D3-220ENST00000505307 MBTPS1Q14703 1052 aa22.92■■□□□ 1.26
UBE2D3-220ENST00000505307 MICU3Q86XE3 530 aa22.92■■□□□ 1.26
UBE2D3-220ENST00000505307 ARNTL2Q8WYA1 636 aa22.92■■□□□ 1.26
UBE2D3-220ENST00000505307 LRRC2Q9BYS8 371 aa22.92■■□□□ 1.26
UBE2D3-220ENST00000505307 MTCH2Q9Y6C9 303 aa22.92■■□□□ 1.26
UBE2D3-220ENST00000505307 TREHO43280 583 aa22.91■■□□□ 1.26
UBE2D3-220ENST00000505307 DEFB103AP81534 67 aa22.91■■□□□ 1.26
UBE2D3-220ENST00000505307 COL9A3Q14050 684 aaPredicted RBP22.91■■□□□ 1.26
UBE2D3-220ENST00000505307 KRT32Q14532 448 aa22.91■■□□□ 1.26
UBE2D3-220ENST00000505307 APOA5Q6Q788 366 aa22.91■■□□□ 1.26
UBE2D3-220ENST00000505307 DHX32Q7L7V1 743 aaKnown RBP22.91■■□□□ 1.26
UBE2D3-220ENST00000505307 CCDC82Q8N4S0 544 aa22.91■■□□□ 1.26
UBE2D3-220ENST00000505307 CERS4Q9HA82 394 aa22.91■■□□□ 1.26
UBE2D3-220ENST00000505307 NRCAMQ92823 1304 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 EXOSC10Q01780 885 aaKnown RBP22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 AAK1Q2M2I8 961 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 PLEKHG4Q58EX7 1191 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 UTP14CQ5TAP6 766 aaKnown RBP22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 HEATR3Q7Z4Q2 680 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 MICALL1Q8N3F8 863 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 IL27Q8NEV9 243 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 DBF4BQ8NFT6 615 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 SETD4Q9NVD3 440 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 UBIAD1Q9Y5Z9 338 aa22.9■■□□□ 1.26
UBE2D3-220ENST00000505307 RFXAPO00287 272 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 CDC45O75419 566 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 AMHP03971 560 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 HMGB1P09429 215 aaKnown RBP22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 KCNA2P16389 499 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 ITGB5P18084 799 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 MTMR1Q13613 665 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 PPP1R18Q6NYC8 613 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 RAB11FIP4Q86YS3 637 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 SEPT1Q8WYJ6 367 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 SEPT8Q92599 483 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 LMCD1Q9NZU5 365 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 PCDHA6Q9UN73 950 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 PCDHA8Q9Y5H6 950 aa22.89■■□□□ 1.25
UBE2D3-220ENST00000505307 hCG_1642624A0A1W2PR95 340 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 EPOPA6NHQ4 379 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 hCG_1984214I3L0E3 225 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 ZBTB43O43298 467 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 ARHGEF15O94989 841 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 TCF7P36402 384 aaPredicted RBP22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 RCAN1P53805 252 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 ADAM17P78536 824 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 SP4Q02446 784 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 UBE2SQ16763 222 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 RTN1Q16799 776 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 TCTN1Q2MV58 587 aa22.88■■□□□ 1.25
UBE2D3-220ENST00000505307 TRIM50Q86XT4 487 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms