RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 EVI5O60447 810 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 KPNA6O60684 536 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 PPFIA4O75335 1185 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 HOXD8P13378 290 aaPredicted RBP15.4■□□□□ 0.06
COL1A1-208ENST00000494334 GJB2P29033 226 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 RTP1P59025 263 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 PSMC6P62333 389 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 DGKDQ16760 1214 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 PRR16Q569H4 304 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 SNX21Q969T3 373 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 LENG9Q96B70 501 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 MTG1Q9BT17 334 aaPredicted RBP15.4■□□□□ 0.06
COL1A1-208ENST00000494334 GRIN2DO15399 1336 aa15.4■□□□□ 0.06
COL1A1-208ENST00000494334 CYP3A7-CYP3A51PA0A087WV96 503 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 FAM205CA6NFA0 338 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 K7ELQ4 463 aaPredicted RBP15.39■□□□□ 0.05
COL1A1-208ENST00000494334 ARVCFO00192 962 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 CYP3A7P24462 503 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 CDK7P50613 346 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 SETQ01105 290 aaPredicted RBP15.39■□□□□ 0.05
COL1A1-208ENST00000494334 SP4Q02446 784 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 ITGB3BPQ13352 177 aaPredicted RBP15.39■□□□□ 0.05
COL1A1-208ENST00000494334 ITGA7Q13683 1181 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 TRIM60Q495X7 471 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 SLC43A3Q8NBI5 491 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 KAT2BQ92831 832 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 GPR20Q99678 358 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 ATP11BQ9Y2G3 1177 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 NFASCO94856 1347 aa15.39■□□□□ 0.05
COL1A1-208ENST00000494334 NOP56O00567 594 aaKnown RBP15.38■□□□□ 0.05
COL1A1-208ENST00000494334 DHX15O43143 795 aaKnown RBP15.38■□□□□ 0.05
COL1A1-208ENST00000494334 TDP2O95551 362 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 SAFBQ15424 915 aaKnown RBP eCLIP15.38■□□□□ 0.05
COL1A1-208ENST00000494334 LETM2Q2VYF4 491 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 Q4G0T1 1027 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 MOXD1Q6UVY6 613 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 NEK8Q86SG6 692 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 C7orf61Q8IZ16 206 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 MBOAT7Q96N66 472 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 UIMC1Q96RL1 719 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 ZNF577Q9BSK1 485 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 KIF3AQ9Y496 699 aa15.38■□□□□ 0.05
COL1A1-208ENST00000494334 GSTTP1A0A1W2PQM5 241 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 IPO5O00410 1097 aaKnown RBP15.37■□□□□ 0.05
COL1A1-208ENST00000494334 MSH4O15457 936 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 TLE2Q04725 743 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 NBPF20Q3BBV1 942 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 PPP4R3AQ6IN85 833 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 ANKRD33Q7Z3H0 272 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 SEPT1Q8WYJ6 367 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 TOX2Q96NM4 488 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 SDF4Q9BRK5 362 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 C16orf70Q9BSU1 422 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 FOXP1Q9H334 677 aaPredicted RBP15.37■□□□□ 0.05
COL1A1-208ENST00000494334 JPH1Q9HDC5 661 aaPredicted RBP15.37■□□□□ 0.05
COL1A1-208ENST00000494334 SLC9A2Q9UBY0 812 aa15.37■□□□□ 0.05
COL1A1-208ENST00000494334 DDX39AO00148 427 aaKnown RBP15.36■□□□□ 0.05
COL1A1-208ENST00000494334 CCNT1O60563 726 aaKnown RBP15.36■□□□□ 0.05
COL1A1-208ENST00000494334 PQBP1O60828 265 aaKnown RBP15.36■□□□□ 0.05
COL1A1-208ENST00000494334 F2P00734 622 aa15.36■□□□□ 0.05
COL1A1-208ENST00000494334 LGALS2P05162 132 aa15.36■□□□□ 0.05
COL1A1-208ENST00000494334 ZNF286BP0CG31 522 aa15.36■□□□□ 0.05
COL1A1-208ENST00000494334 PPP1R13LQ8WUF5 828 aa15.36■□□□□ 0.05
COL1A1-208ENST00000494334 INTS4Q96HW7 963 aaKnown RBP15.36■□□□□ 0.05
COL1A1-208ENST00000494334 SEZ6LQ9BYH1 1024 aa15.36■□□□□ 0.05
COL1A1-208ENST00000494334 TBC1D22BQ9NU19 505 aa15.36■□□□□ 0.05
COL1A1-208ENST00000494334 DDX25Q9UHL0 483 aaKnown RBP15.36■□□□□ 0.05
COL1A1-208ENST00000494334 NR2E3Q9Y5X4 410 aa15.36■□□□□ 0.05
COL1A1-208ENST00000494334 MYH7BA7E2Y1 1941 aa15.36■□□□□ 0.05
COL1A1-208ENST00000494334 KIF28PB7ZC32 967 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 HAS3O00219 553 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 SLC37A4O43826 429 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 CCNE2O96020 404 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 TCF7P36402 384 aaPredicted RBP15.35■□□□□ 0.05
COL1A1-208ENST00000494334 PSEN2P49810 448 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 CHMP4BP1P59074 171 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 MFSD10Q14728 455 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 UTP14CQ5TAP6 766 aaKnown RBP15.35■□□□□ 0.05
COL1A1-208ENST00000494334 LARP1BQ659C4 914 aaKnown RBP15.35■□□□□ 0.05
COL1A1-208ENST00000494334 HSCBQ8IWL3 235 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 FAM126BQ8IXS8 530 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 GJA10Q969M2 543 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 NAP1L4Q99733 375 aaKnown RBP15.35■□□□□ 0.05
COL1A1-208ENST00000494334 KATNAL1Q9BW62 490 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 MROH7Q68CQ1 1323 aa15.35■□□□□ 0.05
COL1A1-208ENST00000494334 DCDC2CA8MYV0 355 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 H3BRB1 525 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 WNT7AO00755 349 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 ATG7O95352 703 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 GCFC2P16383 781 aaKnown RBP15.34■□□□□ 0.05
COL1A1-208ENST00000494334 U2AF2P26368 475 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL1A1-208ENST00000494334 ACTR2P61160 394 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 FAAP100Q0VG06 881 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 GNL2Q13823 731 aaKnown RBP15.34■□□□□ 0.05
COL1A1-208ENST00000494334 KIAA0753Q2KHM9 967 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 NFRKBQ6P4R8 1299 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 TRIM50Q86XT4 487 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 ETNPPLQ8TBG4 499 aa15.34■□□□□ 0.05
COL1A1-208ENST00000494334 SLC5A5Q92911 643 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms