RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CRYGNQ8WXF5 182 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 ALG1Q9BT22 464 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 STARD7Q9NQZ5 370 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
UBA3-211ENST00000493957 ATP11BQ9Y2G3 1177 aa13.32□□□□□ -0.28
UBA3-211ENST00000493957 A6NJR5 290 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 FIBPO43427 364 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
UBA3-211ENST00000493957 MMP3P08254 477 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 ARP10275 920 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 GNA11P29992 359 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 PSEN1P49768 467 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 PURAQ00577 322 aaKnown RBP13.31□□□□□ -0.28
UBA3-211ENST00000493957 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
UBA3-211ENST00000493957 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 XRRA1Q6P2D8 792 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 DHX37Q8IY37 1157 aaKnown RBP13.31□□□□□ -0.28
UBA3-211ENST00000493957 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 PHF20Q9BVI0 1012 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 GLT8D2Q9H1C3 349 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 EHMT1Q9H9B1 1298 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 PCDHA4Q9UN74 947 aa13.31□□□□□ -0.28
UBA3-211ENST00000493957 FAM86B1E9PN63 330 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 STAM2O75886 525 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 FAM86B2P0C5J1 330 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 ZNF286BP0CG31 522 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 KCNA2P16389 499 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 CPT1AP50416 773 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 SP4Q02446 784 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 TLE2Q04725 743 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 HSDL1Q3SXM5 330 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 GNPTABQ3T906 1256 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 CYFIP1Q7L576 1253 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 SH3RF1Q7Z6J0 888 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 BLIDQ8IZY5 108 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 ZNF710Q8N1W2 664 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 DAGLBQ8NCG7 672 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 EMID1Q96A84 441 aaPredicted RBP13.3□□□□□ -0.28
UBA3-211ENST00000493957 VTI1AQ96AJ9 217 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 GPRASP2Q96D09 838 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
UBA3-211ENST00000493957 GLT1D1Q96MS3 346 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 MXRA8Q9BRK3 442 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 JADE2Q9NQC1 790 aa13.3□□□□□ -0.28
UBA3-211ENST00000493957 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 LOXHD1Q8IVV2 1947 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 TRIOBPQ9H2D6 2365 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 EVPLQ92817 2033 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 IGLV3-22A0A075B6J6 115 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 RBAK-RBAKDNI3L0D1 243 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 PQBP1O60828 265 aaKnown RBP13.29□□□□□ -0.28
UBA3-211ENST00000493957 TGFB3P10600 412 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 GUCY1B3Q02153 619 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 MTMR1Q13613 665 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 LAMC2Q13753 1193 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 EARS2Q5JPH6 523 aaKnown RBP13.29□□□□□ -0.28
UBA3-211ENST00000493957 KCNV1Q6PIU1 500 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 NLRX1Q86UT6 975 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 TEX2Q8IWB9 1127 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 PPTC7Q8NI37 304 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 BICD2Q8TD16 824 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 KAT2BQ92831 832 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 TMX3Q96JJ7 454 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
UBA3-211ENST00000493957 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 ELP1O95163 1332 aa13.29□□□□□ -0.28
UBA3-211ENST00000493957 A0A0U1RQG5 324 aaPredicted RBP13.28□□□□□ -0.28
UBA3-211ENST00000493957 ARVCFO00192 962 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 ZEB2O60315 1214 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 CYP3A4P08684 503 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 CDK7P50613 346 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 CHMP4BP1P59074 171 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 NR5A1Q13285 461 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 ITGB3BPQ13352 177 aaPredicted RBP13.28□□□□□ -0.28
UBA3-211ENST00000493957 ITGA7Q13683 1181 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 TBCKQ8TEA7 893 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 MTG1Q9BT17 334 aaPredicted RBP13.28□□□□□ -0.28
UBA3-211ENST00000493957 MLXIPQ9HAP2 919 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 AGO4Q9HCK5 861 aaKnown RBP13.28□□□□□ -0.28
UBA3-211ENST00000493957 PDLIM7Q9NR12 457 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 KCNH7Q9NS40 1196 aa13.28□□□□□ -0.28
UBA3-211ENST00000493957 TET1Q8NFU7 2136 aa13.27□□□□□ -0.28
UBA3-211ENST00000493957 TRIM43BA6NCK2 446 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 MEIS1O00470 390 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 HOXD8P13378 290 aaPredicted RBP13.27□□□□□ -0.29
UBA3-211ENST00000493957 ITGB8P26012 769 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 ZNF76P36508 570 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 FAAP100Q0VG06 881 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 INF2Q27J81 1249 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 NBPF20Q3BBV1 942 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.29
UBA3-211ENST00000493957 KRT40Q6A162 431 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 METTL7BQ6UX53 244 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 PLA2G4DQ86XP0 818 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 TRIM50Q86XT4 487 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms