RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 RABGGTBP53611 331 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 NEDD9Q14511 834 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 UTP14CQ5TAP6 766 aaKnown RBP16.08■□□□□ 0.16
VTI1A-206ENST00000489142 METTL7BQ6UX53 244 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 TIFAQ96CG3 184 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 GPR20Q99678 358 aa16.08■□□□□ 0.16
VTI1A-206ENST00000489142 LARP6Q9BRS8 491 aaKnown RBP16.08■□□□□ 0.16
VTI1A-206ENST00000489142 FTOQ9C0B1 505 aaKnown RBP eCLIP16.08■□□□□ 0.16
VTI1A-206ENST00000489142 ADAMTS3O15072 1205 aa16.07■□□□□ 0.16
VTI1A-206ENST00000489142 MYOGP15173 224 aa16.07■□□□□ 0.16
VTI1A-206ENST00000489142 GRIN2CQ14957 1233 aa16.07■□□□□ 0.16
VTI1A-206ENST00000489142 NLRX1Q86UT6 975 aa16.07■□□□□ 0.16
VTI1A-206ENST00000489142 MTIF3Q9H2K0 278 aaKnown RBP16.07■□□□□ 0.16
VTI1A-206ENST00000489142 RIC8AQ9NPQ8 531 aa16.07■□□□□ 0.16
VTI1A-206ENST00000489142 YBX2Q9Y2T7 364 aaKnown RBP16.07■□□□□ 0.16
VTI1A-206ENST00000489142 CHD9Q3L8U1 2897 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 H3BRB1 525 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 CKBP12277 381 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 KCNA2P16389 499 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 XRRA1Q6P2D8 792 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 LRRC8DQ7L1W4 858 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 CCDC155Q8N6L0 562 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 SLC17A8Q8NDX2 589 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 CYP2W1Q8TAV3 490 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 CAGE1Q8TC20 777 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 PHKBQ93100 1093 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 USP26Q9BXU7 913 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 NKX2-4Q9H2Z4 354 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 ZNF576Q9H609 170 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 TUT1Q9H6E5 874 aaKnown RBP16.06■□□□□ 0.16
VTI1A-206ENST00000489142 NCOA5Q9HCD5 579 aaKnown RBP16.06■□□□□ 0.16
VTI1A-206ENST00000489142 BARHL2Q9NY43 387 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 UBIAD1Q9Y5Z9 338 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
VTI1A-206ENST00000489142 SELPP16109 830 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 PSMA5P28066 241 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 RFC2P35250 354 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 RCAN1P53805 252 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
VTI1A-206ENST00000489142 MTMR1Q13613 665 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 GPNMBQ14956 572 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 PFKFB3Q16875 520 aaPredicted RBP16.05■□□□□ 0.16
VTI1A-206ENST00000489142 TRIM71Q2Q1W2 868 aaKnown RBP16.05■□□□□ 0.16
VTI1A-206ENST00000489142 PPP1R18Q6NYC8 613 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 AFAP1L1Q8TED9 768 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 GPRASP2Q96D09 838 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 ANO3Q9BYT9 981 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
VTI1A-206ENST00000489142 KAT6AQ92794 2004 aa16.05■□□□□ 0.16
VTI1A-206ENST00000489142 NID2Q14112 1375 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 C17orf102A2RUQ5 167 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 NBNO60934 754 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 PFKMP08237 780 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 SCG2P13521 617 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 FOSL2P15408 326 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
VTI1A-206ENST00000489142 TCF7P36402 384 aaPredicted RBP16.04■□□□□ 0.16
VTI1A-206ENST00000489142 PTK7Q13308 1070 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 TOB2Q14106 344 aaPredicted RBP16.04■□□□□ 0.16
VTI1A-206ENST00000489142 TCTN1Q2MV58 587 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 ZNF618Q5T7W0 954 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 JAKMIP3Q5VZ66 844 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 RUFY3Q7L099 469 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 ATP6V0A1Q93050 837 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 SENP7Q9BQF6 1050 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 EHMT1Q9H9B1 1298 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 JADE2Q9NQC1 790 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 MSRAQ9UJ68 235 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 MYO9BQ13459 2157 aa16.04■□□□□ 0.16
VTI1A-206ENST00000489142 TMEM265A0A087WTH1 108 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 TREHO43280 583 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 ACTN1P12814 892 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 MARK3P27448 753 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
VTI1A-206ENST00000489142 THPOP40225 353 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 MBTPS1Q14703 1052 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 RAB30Q15771 203 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 PKN1Q16512 942 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 TMCO2Q7Z6W1 182 aaPredicted RBP16.03■□□□□ 0.16
VTI1A-206ENST00000489142 MXRA8Q9BRK3 442 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 SLC26A6Q9BXS9 759 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 RNPEPQ9H4A4 650 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 PRDM12Q9H4Q4 367 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 ZSWIM6Q9HCJ5 1215 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 SETD4Q9NVD3 440 aa16.03■□□□□ 0.16
VTI1A-206ENST00000489142 UNC80Q8N2C7 3258 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 GSTTP1A0A1W2PQM5 241 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 hCG_1984214I3L0E3 225 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 ARP10275 920 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.16
VTI1A-206ENST00000489142 STK3Q13188 491 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 NTRK3Q16288 839 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 TRAF7Q6Q0C0 670 aa16.02■□□□□ 0.16
VTI1A-206ENST00000489142 SERINC5Q86VE9 423 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms