RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 AKAP17AQ02040 695 aaKnown RBP20.01■□□□□ 0.79
ATG3-205ENST00000488910 CAGE1Q8TC20 777 aa20.01■□□□□ 0.79
ATG3-205ENST00000488910 CCDC12Q8WUD4 166 aaPredicted RBP20.01■□□□□ 0.79
ATG3-205ENST00000488910 GPR20Q99678 358 aa20.01■□□□□ 0.79
ATG3-205ENST00000488910 JADE2Q9NQC1 790 aa20.01■□□□□ 0.79
ATG3-205ENST00000488910 H3BRB1 525 aa20■□□□□ 0.79
ATG3-205ENST00000488910 IQCF3P0C7M6 154 aa20■□□□□ 0.79
ATG3-205ENST00000488910 IFNAR1P17181 557 aa20■□□□□ 0.79
ATG3-205ENST00000488910 AP3B2Q13367 1082 aa20■□□□□ 0.79
ATG3-205ENST00000488910 MTMR1Q13613 665 aa20■□□□□ 0.79
ATG3-205ENST00000488910 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
ATG3-205ENST00000488910 NTRK3Q16288 839 aa20■□□□□ 0.79
ATG3-205ENST00000488910 ZNF697Q5TEC3 545 aa20■□□□□ 0.79
ATG3-205ENST00000488910 MCTP2Q6DN12 878 aa20■□□□□ 0.79
ATG3-205ENST00000488910 ZNF274Q96GC6 653 aaPredicted RBP20■□□□□ 0.79
ATG3-205ENST00000488910 SCLYQ96I15 445 aa20■□□□□ 0.79
ATG3-205ENST00000488910 CTAGE1Q96RT6 745 aa20■□□□□ 0.79
ATG3-205ENST00000488910 TUT1Q9H6E5 874 aaKnown RBP20■□□□□ 0.79
ATG3-205ENST00000488910 ESYT2A0FGR8 921 aa19.99■□□□□ 0.79
ATG3-205ENST00000488910 LGALS2P05162 132 aa19.99■□□□□ 0.79
ATG3-205ENST00000488910 CLK2P49760 499 aaKnown RBP19.99■□□□□ 0.79
ATG3-205ENST00000488910 PKN1Q16512 942 aa19.99■□□□□ 0.79
ATG3-205ENST00000488910 AFAP1L1Q8TED9 768 aa19.99■□□□□ 0.79
ATG3-205ENST00000488910 MXRA8Q9BRK3 442 aa19.99■□□□□ 0.79
ATG3-205ENST00000488910 RNF26Q9BY78 433 aaPredicted RBP19.99■□□□□ 0.79
ATG3-205ENST00000488910 ZMYND12Q9H0C1 365 aa19.99■□□□□ 0.79
ATG3-205ENST00000488910 TRIP12Q14669 1992 aaPredicted RBP19.98■□□□□ 0.79
ATG3-205ENST00000488910 TMEM265A0A087WTH1 108 aa19.98■□□□□ 0.79
ATG3-205ENST00000488910 ATP9AO75110 1047 aa19.98■□□□□ 0.79
ATG3-205ENST00000488910 PARNO95453 639 aaKnown RBP19.98■□□□□ 0.79
ATG3-205ENST00000488910 KCNA2P16389 499 aa19.98■□□□□ 0.79
ATG3-205ENST00000488910 RBL2Q08999 1139 aa19.98■□□□□ 0.79
ATG3-205ENST00000488910 PTK7Q13308 1070 aa19.98■□□□□ 0.79
ATG3-205ENST00000488910 ANO3Q9BYT9 981 aa19.98■□□□□ 0.79
ATG3-205ENST00000488910 C6orf50Q9HD87 102 aa19.98■□□□□ 0.79
ATG3-205ENST00000488910 PDRG1Q9NUG6 133 aa19.98■□□□□ 0.79
ATG3-205ENST00000488910 GNA11P29992 359 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 SREBF1P36956 1147 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 ANAPC15P60006 121 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 CCT2P78371 535 aaKnown RBP19.97■□□□□ 0.79
ATG3-205ENST00000488910 OTOP2Q7RTS6 562 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 SEPT1Q8WYJ6 367 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 PHKBQ93100 1093 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 VWCEQ96DN2 955 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 SLC26A6Q9BXS9 759 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 UPF3BQ9BZI7 483 aaKnown RBP19.97■□□□□ 0.79
ATG3-205ENST00000488910 SEMA6BQ9H3T3 888 aa19.97■□□□□ 0.79
ATG3-205ENST00000488910 ZNF215Q9UL58 517 aaPredicted RBP19.97■□□□□ 0.79
ATG3-205ENST00000488910 GNAT1P11488 350 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 ACTN1P12814 892 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 SELPP16109 830 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 CEP55Q53EZ4 464 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 DEFB128Q7Z7B8 93 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 BICD2Q8TD16 824 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 DHX38Q92620 1227 aaKnown RBP19.96■□□□□ 0.79
ATG3-205ENST00000488910 NCOA5Q9HCD5 579 aaKnown RBP19.96■□□□□ 0.79
ATG3-205ENST00000488910 KCNH7Q9NS40 1196 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 CXXC1Q9P0U4 656 aaPredicted RBP19.96■□□□□ 0.79
ATG3-205ENST00000488910 STXBP5LQ9Y2K9 1186 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 DOCK5Q9H7D0 1870 aa19.96■□□□□ 0.79
ATG3-205ENST00000488910 C17orf102A2RUQ5 167 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 MEIS1O00470 390 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 CKBP12277 381 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 HOXC8P31273 242 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 JAKMIP3Q5VZ66 844 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 NIPA1Q7RTP0 329 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 TRIM22Q8IYM9 498 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 CCDC148Q8NFR7 591 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 PGBD1Q96JS3 809 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 SH3GLB2Q9NR46 395 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 TMEM260Q9NX78 707 aa19.95■□□□□ 0.78
ATG3-205ENST00000488910 CPLX1O14810 134 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 CYP3A4P08684 503 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 SMIM10L2AP0DMW4 78 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 SMIM10L2BP0DMW5 78 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 DNAJB2P25686 324 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 TCF7P36402 384 aaPredicted RBP19.94■□□□□ 0.78
ATG3-205ENST00000488910 ZNF76P36508 570 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 ARHGAP4P98171 946 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 ZNF200P98182 395 aaPredicted RBP19.94■□□□□ 0.78
ATG3-205ENST00000488910 SP4Q02446 784 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 SSRP1Q08945 709 aaKnown RBP19.94■□□□□ 0.78
ATG3-205ENST00000488910 UTP14CQ5TAP6 766 aaKnown RBP19.94■□□□□ 0.78
ATG3-205ENST00000488910 CPLX2Q6PUV4 134 aaKnown RBP19.94■□□□□ 0.78
ATG3-205ENST00000488910 LRRC8DQ7L1W4 858 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 SERINC5Q86VE9 423 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 REXO1Q8N1G1 1221 aaKnown RBP19.94■□□□□ 0.78
ATG3-205ENST00000488910 CYP2W1Q8TAV3 490 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 ATP6V0A1Q93050 837 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 FTOQ9C0B1 505 aaKnown RBP eCLIP19.94■□□□□ 0.78
ATG3-205ENST00000488910 RNPEPQ9H4A4 650 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 SLC4A7Q9Y6M7 1214 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 NFASCO94856 1347 aa19.94■□□□□ 0.78
ATG3-205ENST00000488910 SCN5AQ14524 2016 aa19.93■□□□□ 0.78
ATG3-205ENST00000488910 GSTTP1A0A1W2PQM5 241 aa19.93■□□□□ 0.78
ATG3-205ENST00000488910 HIC1Q14526 733 aa19.93■□□□□ 0.78
ATG3-205ENST00000488910 TRIM71Q2Q1W2 868 aaKnown RBP19.93■□□□□ 0.78
ATG3-205ENST00000488910 TIFAQ96CG3 184 aa19.93■□□□□ 0.78
ATG3-205ENST00000488910 IL17RAQ96F46 866 aa19.93■□□□□ 0.78
ATG3-205ENST00000488910 FAM161BQ96MY7 647 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms