RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 GRIPAP1Q4V328 841 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 TDRD3Q9H7E2 651 aaKnown RBP28.91■■■□□ 2.22
HLA-C-208ENST00000487245 CALCOCO1Q9P1Z2 691 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 HDAC6Q9UBN7 1215 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 BMP3P12645 472 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 Q4G0T1 1027 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 CRYGNQ8WXF5 182 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 CCDC42Q96M95 316 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 MMS19Q96T76 1030 aa28.91■■■□□ 2.22
HLA-C-208ENST00000487245 ZNF219Q9P2Y4 722 aaPredicted RBP28.91■■■□□ 2.22
HLA-C-208ENST00000487245 RGPD3A6NKT7 1758 aaPredicted RBP28.9■■■□□ 2.22
HLA-C-208ENST00000487245 RGPD4Q7Z3J3 1758 aa28.9■■■□□ 2.22
HLA-C-208ENST00000487245 ENC1O14682 589 aa28.9■■■□□ 2.22
HLA-C-208ENST00000487245 ARHGAP4P98171 946 aa28.9■■■□□ 2.22
HLA-C-208ENST00000487245 CASP8Q14790 479 aa28.9■■■□□ 2.22
HLA-C-208ENST00000487245 SHROOM1Q2M3G4 852 aaPredicted RBP28.9■■■□□ 2.22
HLA-C-208ENST00000487245 FAM26FQ5R3K3 315 aa28.9■■■□□ 2.22
HLA-C-208ENST00000487245 HAUS3Q68CZ6 603 aa28.9■■■□□ 2.22
HLA-C-208ENST00000487245 ERMNQ8TAM6 284 aa28.9■■■□□ 2.22
HLA-C-208ENST00000487245 VIPAS39Q9H9C1 493 aa28.9■■■□□ 2.22
HLA-C-208ENST00000487245 USO1O60763 962 aaKnown RBP28.89■■■□□ 2.22
HLA-C-208ENST00000487245 GDF11O95390 407 aa28.89■■■□□ 2.22
HLA-C-208ENST00000487245 PLA2G4BP0C869 781 aa28.89■■■□□ 2.22
HLA-C-208ENST00000487245 SECISBP2LQ93073 1101 aaKnown RBP28.89■■■□□ 2.22
HLA-C-208ENST00000487245 EEF2KMTQ96G04 330 aa28.89■■■□□ 2.22
HLA-C-208ENST00000487245 PDE11AQ9HCR9 933 aa28.89■■■□□ 2.22
HLA-C-208ENST00000487245 HERC5Q9UII4 1024 aaKnown RBP28.89■■■□□ 2.22
HLA-C-208ENST00000487245 TFR2Q9UP52 801 aa28.89■■■□□ 2.22
HLA-C-208ENST00000487245 KIAA1024Q9UPX6 916 aa28.89■■■□□ 2.22
HLA-C-208ENST00000487245 ZNF263O14978 683 aa28.89■■■□□ 2.21
HLA-C-208ENST00000487245 NKRFO15226 690 aaKnown RBP eCLIP28.89■■■□□ 2.21
HLA-C-208ENST00000487245 CHRNA5P30532 468 aa28.89■■■□□ 2.21
HLA-C-208ENST00000487245 ACBD3Q9H3P7 528 aa28.89■■■□□ 2.21
HLA-C-208ENST00000487245 TMOD2Q9NZR1 351 aa28.89■■■□□ 2.21
HLA-C-208ENST00000487245 PRLRP16471 622 aa28.88■■■□□ 2.21
HLA-C-208ENST00000487245 FKBP3Q00688 224 aaKnown RBP28.88■■■□□ 2.21
HLA-C-208ENST00000487245 IKQ13123 557 aaPredicted RBP28.88■■■□□ 2.21
HLA-C-208ENST00000487245 ZCWPW2Q504Y3 356 aa28.88■■■□□ 2.21
HLA-C-208ENST00000487245 ZNF572Q7Z3I7 529 aaPredicted RBP28.88■■■□□ 2.21
HLA-C-208ENST00000487245 TRIM58Q8NG06 486 aa28.88■■■□□ 2.21
HLA-C-208ENST00000487245 FAM20AQ96MK3 541 aa28.88■■■□□ 2.21
HLA-C-208ENST00000487245 CEP63Q96MT8 703 aa28.88■■■□□ 2.21
HLA-C-208ENST00000487245 ARHGAP20Q9P2F6 1191 aa28.88■■■□□ 2.21
HLA-C-208ENST00000487245 PITPNM2Q9BZ72 1349 aa28.88■■■□□ 2.21
HLA-C-208ENST00000487245 SPDYE3A6NKU9 549 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 GH2P01242 217 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 ITIH3Q06033 890 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 MAP9Q49MG5 647 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 IQCEQ6IPM2 695 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 ATAD5Q96QE3 1844 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 ERICH4A6NGS2 130 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 GNA14O95837 355 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 SSBP05455 408 aaKnown RBP eCLIP28.87■■■□□ 2.21
HLA-C-208ENST00000487245 SREBF1P36956 1147 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 ETNPPLQ8TBG4 499 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 SH2D4AQ9H788 454 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 ADAM21Q9UKJ8 722 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 JRKLQ9Y4A0 524 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 PCDHA13Q9Y5I0 950 aa28.87■■■□□ 2.21
HLA-C-208ENST00000487245 PJA2O43164 708 aa28.86■■■□□ 2.21
HLA-C-208ENST00000487245 PPIP5K2O43314 1243 aa28.86■■■□□ 2.21
HLA-C-208ENST00000487245 CIITAP33076 1130 aa28.86■■■□□ 2.21
HLA-C-208ENST00000487245 BAP1Q92560 729 aa28.86■■■□□ 2.21
HLA-C-208ENST00000487245 GJA10Q969M2 543 aa28.86■■■□□ 2.21
HLA-C-208ENST00000487245 PRMT6Q96LA8 375 aaPredicted RBP28.86■■■□□ 2.21
HLA-C-208ENST00000487245 E9PMD0 336 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 TACC1O75410 805 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 KIF11P52732 1056 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 CYP27A1Q02318 531 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 GPBP1Q86WP2 473 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 CSRNP1Q96S65 589 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 EPHB6O15197 1021 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 MAPK8IP2Q13387 824 aaPredicted RBP28.85■■■□□ 2.21
HLA-C-208ENST00000487245 LRRC41Q15345 812 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 KCTD17Q8N5Z5 321 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 FAM71BQ8TC56 605 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 RUBCNQ92622 972 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 IFIH1Q9BYX4 1025 aaKnown RBP28.85■■■□□ 2.21
HLA-C-208ENST00000487245 SUGCTQ9HAC7 445 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 ARHGEF10LQ9HCE6 1279 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 MED4Q9NPJ6 270 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 COL4A3BPQ9Y5P4 624 aa28.85■■■□□ 2.21
HLA-C-208ENST00000487245 POTEB3A0JP26 581 aa28.84■■■□□ 2.21
HLA-C-208ENST00000487245 POTECB2RU33 542 aa28.84■■■□□ 2.21
HLA-C-208ENST00000487245 SRGAP2O75044 1071 aa28.84■■■□□ 2.21
HLA-C-208ENST00000487245 CYP11B2P19099 503 aa28.84■■■□□ 2.21
HLA-C-208ENST00000487245 PDXDC1Q6P996 788 aa28.84■■■□□ 2.21
HLA-C-208ENST00000487245 POTEBQ6S5H4 581 aa28.84■■■□□ 2.21
HLA-C-208ENST00000487245 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.84■■■□□ 2.21
HLA-C-208ENST00000487245 SNX12Q9UMY4 172 aa28.84■■■□□ 2.21
HLA-C-208ENST00000487245 SSU72P8A0A1W2PR75 194 aa28.83■■■□□ 2.21
HLA-C-208ENST00000487245 CYP3A4P08684 503 aa28.83■■■□□ 2.21
HLA-C-208ENST00000487245 RXRBP28702 533 aa28.83■■■□□ 2.21
HLA-C-208ENST00000487245 EIF4A3P38919 411 aaKnown RBP28.83■■■□□ 2.21
HLA-C-208ENST00000487245 PRR16Q569H4 304 aa28.83■■■□□ 2.21
HLA-C-208ENST00000487245 SYN2Q92777 582 aaPredicted RBP28.83■■■□□ 2.21
HLA-C-208ENST00000487245 NUCKS1Q9H1E3 243 aaKnown RBP28.83■■■□□ 2.21
HLA-C-208ENST00000487245 MMRN2Q9H8L6 949 aa28.83■■■□□ 2.21
HLA-C-208ENST00000487245 PCDHA2Q9Y5H9 948 aa28.83■■■□□ 2.21
HLA-C-208ENST00000487245 DUSP10Q9Y6W6 482 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms