RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GNEQ9Y223 722 aaKnown RBP12.9□□□□□ -0.34
NUP50-216ENST00000486184 MYH9P35579 1960 aaKnown RBP12.9□□□□□ -0.34
NUP50-216ENST00000486184 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
NUP50-216ENST00000486184 NEMFO60524 1076 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 ZSCAN22P10073 491 aaPredicted RBP12.89□□□□□ -0.35
NUP50-216ENST00000486184 GJA9P57773 515 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 SP4Q02446 784 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 CALCRLQ16602 461 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 GNASQ5JWF2 1037 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 CELF3Q5SZQ8 465 aaKnown RBP12.89□□□□□ -0.35
NUP50-216ENST00000486184 FOXD4L5Q5VV16 416 aaPredicted RBP12.89□□□□□ -0.35
NUP50-216ENST00000486184 LHX8Q68G74 356 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 CYFIP1Q7L576 1253 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 PCSK9Q8NBP7 692 aaKnown RBP12.89□□□□□ -0.35
NUP50-216ENST00000486184 FOXD4L4Q8WXT5 416 aaPredicted RBP12.89□□□□□ -0.35
NUP50-216ENST00000486184 SPATA33Q96N06 139 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 UPF3AQ9H1J1 476 aaKnown RBP12.89□□□□□ -0.35
NUP50-216ENST00000486184 JPH1Q9HDC5 661 aaPredicted RBP12.89□□□□□ -0.35
NUP50-216ENST00000486184 TBC1D22BQ9NU19 505 aa12.89□□□□□ -0.35
NUP50-216ENST00000486184 NFASCO94856 1347 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 DDX39AO00148 427 aaKnown RBP12.88□□□□□ -0.35
NUP50-216ENST00000486184 TBX3O15119 743 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 MSH4O15457 936 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 SLC37A4O43826 429 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 GAS7O60861 476 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 ATP9AO75110 1047 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 KCNA2P16389 499 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 SP2Q02086 613 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 ARHGAP1Q07960 439 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 RESTQ13127 1097 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 ZNF174Q15697 407 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 FSCN1Q16658 493 aaKnown RBP12.88□□□□□ -0.35
NUP50-216ENST00000486184 TMEM63BQ5T3F8 832 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 LRCH2Q5VUJ6 765 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 EMID1Q96A84 441 aaPredicted RBP12.88□□□□□ -0.35
NUP50-216ENST00000486184 MBOAT7Q96N66 472 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 UIMC1Q96RL1 719 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 TEKT3Q9BXF9 490 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 SLC9A2Q9UBY0 812 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 OGDHLQ9ULD0 1010 aa12.88□□□□□ -0.35
NUP50-216ENST00000486184 KIAA0100Q14667 2235 aaKnown RBP12.87□□□□□ -0.35
NUP50-216ENST00000486184 DNM1LO00429 736 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 ADAMTS4O75173 837 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
NUP50-216ENST00000486184 F13A1P00488 732 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 MYL3P08590 195 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 CST5P28325 142 aaPredicted RBP12.87□□□□□ -0.35
NUP50-216ENST00000486184 SOX10P56693 466 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 NUCB2P80303 420 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 BEX3Q00994 111 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 KRT76Q01546 638 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 LRRC41Q15345 812 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 DGKDQ16760 1214 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 ANKLE1Q8NAG6 615 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 AFG1LQ8WV93 481 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 LENG9Q96B70 501 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
NUP50-216ENST00000486184 RIT2Q99578 217 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 POLR3EQ9NVU0 708 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 CEP131Q9UPN4 1083 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 SAMM50Q9Y512 469 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 ATP6V1DQ9Y5K8 247 aa12.87□□□□□ -0.35
NUP50-216ENST00000486184 KAT6AQ92794 2004 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 MOXD2PA6NHM9 499 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 EDIL3O43854 480 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 KPNA6O60684 536 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 BMP15O95972 392 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 MMP3P08254 477 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 OR52Z1P0C646 297 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 PTGS1P23219 599 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 ITGB3BPQ13352 177 aaPredicted RBP12.86□□□□□ -0.35
NUP50-216ENST00000486184 NBR1Q14596 966 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 TMEM266Q2M3C6 531 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 ETNPPLQ8TBG4 499 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 SLC5A5Q92911 643 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 VTI1AQ96AJ9 217 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
NUP50-216ENST00000486184 PCDHB6Q9Y5E3 794 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 ELP1O95163 1332 aa12.86□□□□□ -0.35
NUP50-216ENST00000486184 HTTP42858 3142 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 MYADML2A6NDP7 307 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 A6NJR5 290 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 LAD1O00515 517 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 CHMP2AO43633 222 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 ASGR1P07306 291 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 SFNP31947 248 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 TXKP42681 527 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 TOB1P50616 345 aaPredicted RBP12.85□□□□□ -0.35
NUP50-216ENST00000486184 JAK3P52333 1124 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 PKP1Q13835 747 aa12.85□□□□□ -0.35
NUP50-216ENST00000486184 KCNA10Q16322 511 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms