RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SNX9Q9Y5X1 595 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 PIGBOS1A0A0B4J2F0 54 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SUPT3HB4E1H0 165 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 UQCRBP14927 111 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 EIF2S3P41091 472 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 IL9RQ01113 521 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 C8orf74Q6P047 294 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 BRAPQ7Z569 592 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 KLHL4Q9C0H6 718 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 GID8Q9NWU2 228 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SENP1Q9P0U3 644 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 TMCC3Q9ULS5 477 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 PSAT1Q9Y617 370 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 M0R2C6 588 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ZBED4O75132 1171 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 MSR1P21757 451 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 DCKP27707 260 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 KPNA1P52294 538 aaPredicted RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 PSME3P61289 254 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ASIC1P78348 528 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 WTAPQ15007 396 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 DCAF15Q66K64 600 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 MARK2Q7KZI7 788 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 KBTBD3Q8NAB2 608 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 FAM13CQ8NE31 585 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 RNF217Q8TC41 542 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SSH1Q8WYL5 1049 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 MARK1Q9P0L2 795 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SAP30BPQ9UHR5 308 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 METTL21EPA6NDL7 271 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 CDC40O60508 579 aaKnown RBP eCLIP5.83□□□□□ -1.48
USF3-202ENST00000478658 FYNP06241 537 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ZCCHC18P0CG32 403 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ALDH1A3P47895 512 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 GTF2H3Q13889 308 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SLC9A5Q14940 896 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 TERF2Q15554 542 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 FSCN1Q16658 493 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 KIAA1755Q5JYT7 1200 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 C19orf18Q8NEA5 215 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SYMPKQ92797 1274 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 RIT1Q92963 219 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 NEDD4LQ96PU5 975 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 FHDC1Q9C0D6 1143 aaPredicted RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 HMG20AQ9NP66 347 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ASIC3Q9UHC3 531 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 PRR23AA6NEV1 266 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 POTECB2RU33 542 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ADCY3O60266 1144 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 PSIP1O75475 530 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 KRT75O95678 551 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 EPS8Q12929 822 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 STXBP2Q15833 593 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SPOPLQ6IQ16 392 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 SDE2Q6IQ49 451 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 DTHD1Q6ZMT9 781 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 RHOT2Q8IXI1 618 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 FAM178BQ8IXR5 827 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 GANCQ8TET4 914 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 NT5C3AQ9H0P0 336 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 MIS18AQ9NYP9 233 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ELF1P32519 619 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 IST1P53990 364 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 ADKP55263 362 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 MYL5Q02045 173 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 CUL3Q13618 768 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 THOC5Q13769 683 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 GPR158Q5T848 1215 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 TCP11L2Q8N4U5 519 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 HDAC2Q92769 488 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 OTULINQ96BN8 352 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.83□□□□□ -1.48
USF3-202ENST00000478658 AARSP49588 968 aaKnown RBP eCLIP5.83□□□□□ -1.48
USF3-202ENST00000478658 NT5C2P49902 561 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 NAPAP54920 295 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 STX4Q12846 297 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 CEP70Q8NHQ1 597 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 VPS35Q96QK1 796 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 TBC1D2Q9BYX2 928 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 CNOT10Q9H9A5 744 aaKnown RBP5.83□□□□□ -1.48
USF3-202ENST00000478658 GGA1Q9UJY5 639 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 CAPN11Q9UMQ6 739 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 L3MBTL1Q9Y468 752 aa5.83□□□□□ -1.48
USF3-202ENST00000478658 STK36Q9NRP7 1315 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 ATN1P54259 1190 aaPredicted RBP5.82□□□□□ -1.48
USF3-202ENST00000478658 NR1H3Q13133 447 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 EFTUD2Q15029 972 aaKnown RBP eCLIP5.82□□□□□ -1.48
USF3-202ENST00000478658 GSTA3Q16772 222 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 RASIP1Q5U651 963 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 PPP4R3CPQ6ZMV5 832 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 FAM47EQ6ZV65 393 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 TMC6Q7Z403 805 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 SLC26A7Q8TE54 656 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 BTN2A2Q8WVV5 523 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 SNF8Q96H20 258 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 MYD88Q99836 296 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 PRDM11Q9NQV5 511 aa5.82□□□□□ -1.48
USF3-202ENST00000478658 C20orf96Q9NUD7 363 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms